RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FAM187BQ17R55 369 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 PLPP4Q5VZY2 271 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 PDE12Q6L8Q7 609 aaKnown RBP27.81■■■□□ 2.04
FANCA-228ENST00000567943 CABP7Q86V35 215 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 SPRYD3Q8NCJ5 442 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 CNNM3Q8NE01 707 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 PPP2R3CQ969Q6 453 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 CDK5RAP3Q96JB5 506 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 NXF3Q9H4D5 531 aaKnown RBP27.81■■■□□ 2.04
FANCA-228ENST00000567943 ZSCAN16Q9H4T2 348 aaPredicted RBP27.81■■■□□ 2.04
FANCA-228ENST00000567943 PUF60Q9UHX1 559 aaKnown RBP27.81■■■□□ 2.04
FANCA-228ENST00000567943 USP20Q9Y2K6 914 aa27.81■■■□□ 2.04
FANCA-228ENST00000567943 INPPL1O15357 1258 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 ITGA4P13612 1032 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 NAMPTP43490 491 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 SLC11A1P49279 550 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 CEBPZQ03701 1054 aaKnown RBP27.8■■■□□ 2.04
FANCA-228ENST00000567943 NCBP1Q09161 790 aaKnown RBP27.8■■■□□ 2.04
FANCA-228ENST00000567943 KCNC3Q14003 757 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 PTPAQ15257 358 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 DUSP6Q16828 381 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 FAM178BQ8IXR5 827 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 DAW1Q8N136 415 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 KIFC3Q9BVG8 833 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 RUSC1Q9BVN2 902 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 VN1R3Q9BXE9 311 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 NT5C3AQ9H0P0 336 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 GBP3Q9H0R5 595 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 MIOSQ9NXC5 875 aa27.8■■■□□ 2.04
FANCA-228ENST00000567943 ARL5CA6NH57 179 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 POMCP01189 267 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 LONP1P36776 959 aaKnown RBP27.79■■■□□ 2.04
FANCA-228ENST00000567943 UBA7P41226 1012 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 RNASELQ05823 741 aaKnown RBP27.79■■■□□ 2.04
FANCA-228ENST00000567943 PUS10Q3MIT2 529 aaKnown RBP27.79■■■□□ 2.04
FANCA-228ENST00000567943 ZBTB8OSQ8IWT0 167 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 URGCPQ8TCY9 931 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 IGSF21Q96ID5 467 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 PRIMPOLQ96LW4 560 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 ZFP42Q96MM3 310 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 GAD1Q99259 594 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 ENTPD7Q9NQZ7 604 aa27.79■■■□□ 2.04
FANCA-228ENST00000567943 PRMT7Q9NVM4 692 aaPredicted RBP27.79■■■□□ 2.04
FANCA-228ENST00000567943 SSBP05455 408 aaKnown RBP eCLIP27.78■■■□□ 2.04
FANCA-228ENST00000567943 MARCKSP29966 332 aaPredicted RBP27.78■■■□□ 2.04
FANCA-228ENST00000567943 SLC27A1Q6PCB7 646 aa27.78■■■□□ 2.04
FANCA-228ENST00000567943 GSTCDQ8NEC7 633 aa27.78■■■□□ 2.04
FANCA-228ENST00000567943 KIFAP3Q92845 792 aa27.78■■■□□ 2.04
FANCA-228ENST00000567943 KHSRPQ92945 711 aaKnown RBP eCLIP27.78■■■□□ 2.044e-11■■■■□ 26.4
FANCA-228ENST00000567943 NGRNQ9NPE2 291 aaKnown RBP27.78■■■□□ 2.04
FANCA-228ENST00000567943 BARX2Q9UMQ3 279 aaPredicted RBP27.78■■■□□ 2.04
FANCA-228ENST00000567943 MBTPS2O43462 519 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 NPTXRO95502 500 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 MLH1P40692 756 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 NDUFV1P49821 464 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 MAPK7Q13164 816 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 PPP2R5AQ15172 486 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 TMEM119Q4V9L6 283 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 RINT1Q6NUQ1 792 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 C1orf186Q6ZWK4 172 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 KCTD17Q8N5Z5 321 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 MRPL43Q8N983 215 aaKnown RBP27.77■■■□□ 2.04
FANCA-228ENST00000567943 DEPTORQ8TB45 409 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 CALML4Q96GE6 196 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 TMEM169Q96HH4 297 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 IFT74Q96LB3 600 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 USP28Q96RU2 1077 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 APOL6Q9BWW8 343 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 C2orf40Q9H1Z8 148 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 PDZD7Q9H5P4 517 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 UBN1Q9NPG3 1134 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 KANSL3Q9P2N6 904 aa27.77■■■□□ 2.04
FANCA-228ENST00000567943 C2orf71A6NGG8 1288 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 AKAP5P24588 427 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 FOXD4L5Q5VV16 416 aaPredicted RBP27.76■■■□□ 2.03
FANCA-228ENST00000567943 TMC7Q7Z402 723 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 LRRC15Q8TF66 581 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 FOXD4L4Q8WXT5 416 aaPredicted RBP27.76■■■□□ 2.03
FANCA-228ENST00000567943 CD207Q9UJ71 328 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 MYH11P35749 1972 aa27.76■■■□□ 2.03
FANCA-228ENST00000567943 ACKR2O00590 384 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 SLC26A4O43511 780 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 HIP1RO75146 1068 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 PRKCBP05771 671 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 SCNN1GP51170 649 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 SMAD2Q15796 467 aaKnown RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 MAPK6Q16659 721 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 DDX53Q86TM3 631 aaKnown RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 COLGALT2Q8IYK4 626 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 VPS52Q8N1B4 723 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 SYT2Q8N9I0 419 aaPredicted RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 CDCA3Q99618 268 aaPredicted RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 TRIM6Q9C030 488 aaPredicted RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 ZBP1Q9H171 429 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 FBXO2Q9UK22 296 aaPredicted RBP27.75■■■□□ 2.03
FANCA-228ENST00000567943 GIT1Q9Y2X7 761 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 TRIOO75962 3097 aa27.75■■■□□ 2.03
FANCA-228ENST00000567943 PLA2G4BP0C869 781 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 DSC1Q08554 894 aa27.74■■■□□ 2.03
FANCA-228ENST00000567943 COASYQ13057 564 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms