RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 GABBR2O75899 941 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 TRIM16O95361 564 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 PLA2G2AP14555 144 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 EIF4BP23588 611 aaKnown RBP11□□□□□ -0.65
CAPN3-216ENST00000567071 RAP1GAPP47736 663 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 ALX1Q15699 326 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 LIN9Q5TKA1 542 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 LARP1BQ659C4 914 aaKnown RBP11□□□□□ -0.65
CAPN3-216ENST00000567071 GAB3Q8WWW8 586 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 HNRNPABQ99729 332 aaKnown RBP11□□□□□ -0.65
CAPN3-216ENST00000567071 SDF4Q9BRK5 362 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 RXFP1Q9HBX9 757 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 TMEM9BQ9NQ34 198 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11□□□□□ -0.65
CAPN3-216ENST00000567071 POLIQ9UNA4 740 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 AKT3Q9Y243 479 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 APC2O95996 2303 aa11□□□□□ -0.65
CAPN3-216ENST00000567071 PIEZO2Q9H5I5 2752 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TK2O00142 265 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 BACH1O14867 736 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 MAFGO15525 162 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 MAP3K13O43283 966 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TGM5O43548 720 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 HNRNPA1P09651 372 aaKnown RBP eCLIP10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TMOD1P28289 359 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 HOXA6P31267 233 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 NT5C2P49902 561 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 NLRP11P59045 1033 aaKnown RBP10.99□□□□□ -0.65
CAPN3-216ENST00000567071 CREMQ03060 361 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TTC22Q5TAA0 569 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TCEAL6Q6IPX3 200 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 KBTBD6Q86V97 674 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 PI4K2BQ8TCG2 481 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 PIK3R5Q8WYR1 880 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TCEAL3Q969E4 200 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 MTMR8Q96EF0 704 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 UBL7Q96S82 380 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TMEM175Q9BSA9 504 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 CCDC86Q9H6F5 360 aaKnown RBP10.99□□□□□ -0.65
CAPN3-216ENST00000567071 RAI2Q9Y5P3 530 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
CAPN3-216ENST00000567071 SHROOM3Q8TF72 1996 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 K7ESF4 209 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 FOXP2O15409 715 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 GSPT1P15170 499 aaKnown RBP10.98□□□□□ -0.65
CAPN3-216ENST00000567071 PHKA2P46019 1235 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 ACTR2P61160 394 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 ELF2Q15723 593 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 LONRF3Q496Y0 759 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 PPM1LQ5SGD2 360 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 TWF2Q6IBS0 349 aaKnown RBP10.98□□□□□ -0.65
CAPN3-216ENST00000567071 C1orf228Q6PIY5 440 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 DEFB124Q8NES8 71 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 IRF7Q92985 503 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 PGBD4Q96DM1 585 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 OSBPL3Q9H4L5 887 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 CHST12Q9NRB3 414 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 KANSL3Q9P2N6 904 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 PIAS3Q9Y6X2 628 aa10.98□□□□□ -0.65
CAPN3-216ENST00000567071 PCNX2A6NKB5 2137 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 BAZ2BQ9UIF8 2168 aaKnown RBP10.97□□□□□ -0.65
CAPN3-216ENST00000567071 SHISA7A6NL88 538 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 J3QKU1 62 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 NRP1O14786 923 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 ARHGAP6O43182 974 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 NR1I2O75469 434 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 AKAP3O75969 853 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 CAVIN2O95810 425 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 FGAP02671 866 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 PRB1P04280 392 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 CHRNB1P11230 501 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 RAB27AP51159 221 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 HAND2P61296 217 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 NTHL1P78549 312 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 SCAPQ12770 1279 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 PTGDRQ13258 359 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 UAP1L1Q3KQV9 507 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 VPS53Q5VIR6 699 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 GLYCTKQ8IVS8 523 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 NPAS3Q8IXF0 933 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 CKAP2LQ8IYA6 745 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 ITFG1Q8TB96 612 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 LPPQ93052 612 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
CAPN3-216ENST00000567071 GDE1Q9NZC3 331 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 KCNH3Q9ULD8 1083 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 CACNA1EQ15878 2313 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 CFAP46Q8IYW2 2715 aa10.97□□□□□ -0.65
CAPN3-216ENST00000567071 ASCC3Q8N3C0 2202 aaKnown RBP10.96□□□□□ -0.65
CAPN3-216ENST00000567071 WDR81Q562E7 1941 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 PNMA6FA0A0J9YX94 578 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 MAGEB2O15479 319 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 OFD1O75665 1012 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms