RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TSPAN1O60635 241 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 MYBP10242 640 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 ACRP10323 421 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 SCP2P22307 547 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 ABCD1P33897 745 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 CASP5P51878 434 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 KCNB1Q14721 858 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 AMHR2Q16671 573 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 TAS1R3Q7RTX0 852 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 HVCN1Q96D96 273 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 NTPCRQ9BSD7 190 aaKnown RBP12.61□□□□□ -0.39
KARS-207ENST00000566560 FGFBP2Q9BYJ0 223 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 ST6GALNAC4Q9H4F1 302 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 TMEM134Q9H6X4 195 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 UBE4BO95155 1302 aa12.61□□□□□ -0.39
KARS-207ENST00000566560 ACKR2O00590 384 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 EIF3DO15371 548 aaKnown RBP eCLIP12.6□□□□□ -0.39
KARS-207ENST00000566560 EDN1P05305 212 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 ACTN1P12814 892 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
KARS-207ENST00000566560 PRPF4BQ13523 1007 aaKnown RBP12.6□□□□□ -0.39
KARS-207ENST00000566560 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 FAM187BQ17R55 369 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 ZC2HC1CQ53FD0 456 aaPredicted RBP12.6□□□□□ -0.39
KARS-207ENST00000566560 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 ZNF720Q7Z2F6 126 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 KCNN1Q92952 543 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
KARS-207ENST00000566560 VWCEQ96DN2 955 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 BICD1Q96G01 975 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 CPB2Q96IY4 423 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 GSDMAQ96QA5 445 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 FTHL17Q9BXU8 183 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
KARS-207ENST00000566560 FZD8Q9H461 694 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 SLC39A2Q9NP94 309 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 TBX20Q9UMR3 447 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
KARS-207ENST00000566560 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
KARS-207ENST00000566560 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 ARF4P18085 180 aaPredicted RBP12.59□□□□□ -0.39
KARS-207ENST00000566560 AXLP30530 894 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 EPHB4P54760 987 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 GTF2BQ00403 316 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 STK4Q13043 487 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 PSMD2Q13200 908 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
KARS-207ENST00000566560 NT5DC1Q5TFE4 455 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
KARS-207ENST00000566560 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
KARS-207ENST00000566560 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 ANKFY1Q9P2R3 1169 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 MAN1B1Q9UKM7 699 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 EXOC7Q9UPT5 735 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
KARS-207ENST00000566560 ZMYM2Q9UBW7 1377 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 BIN1O00499 593 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 N4BP3O15049 544 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 MGEA5O60502 916 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 EFCAB14O75071 495 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 PRPF6O94906 941 aaKnown RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 LIG4P49917 911 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 IKBKEQ14164 716 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 ZNF568Q3ZCX4 644 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 ATF7IP2Q5U623 682 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 ZNF365Q70YC5 407 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 OTOP2Q7RTS6 562 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 SMYD4Q8IYR2 804 aaPredicted RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 SCFD1Q8WVM8 642 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 CCDC51Q96ER9 411 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 ACCSQ96QU6 501 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 ADAM2Q99965 735 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.44e-6■■■□□ 16.3
KARS-207ENST00000566560 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
KARS-207ENST00000566560 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 CHST12Q9NRB3 414 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 TMEM63CQ9P1W3 806 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
KARS-207ENST00000566560 TTC3P53804 2025 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms