RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 TCF20Q9UGU0 1960 aaKnown RBP21.31■■□□□ 1
CCDC113-204ENST00000566498 ACKR2O00590 384 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 ALDH2P05091 517 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 GTF2F1P35269 517 aaKnown RBP eCLIP21.31■■□□□ 1
CCDC113-204ENST00000566498 AFF1P51825 1210 aaKnown RBP21.31■■□□□ 1
CCDC113-204ENST00000566498 GRIN1Q05586 938 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 DHX8Q14562 1220 aaKnown RBP21.31■■□□□ 1
CCDC113-204ENST00000566498 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
CCDC113-204ENST00000566498 TMC7Q7Z402 723 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 ZNF280BQ86YH2 543 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 SLC39A11Q8N1S5 342 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 SPRYD3Q8NCJ5 442 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 ADAMTS19Q8TE59 1207 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 GAD1Q99259 594 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 TIPINQ9BVW5 301 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 ENTPD7Q9NQZ7 604 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 PARP2Q9UGN5 583 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 USP20Q9Y2K6 914 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 PCDHGC5Q9Y5F6 944 aa21.31■■□□□ 1
CCDC113-204ENST00000566498 ARL5CA6NH57 179 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 H3BQ06 376 aaPredicted RBP21.3■■□□□ 1
CCDC113-204ENST00000566498 N4BP3O15049 544 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 SLC26A4O43511 780 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 GALTP07902 379 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 AKAP5P24588 427 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 NPTX2P47972 431 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 NRIP1P48552 1158 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 DMP1Q13316 513 aaPredicted RBP21.3■■□□□ 1
CCDC113-204ENST00000566498 TMEM119Q4V9L6 283 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 FOXD4L5Q5VV16 416 aaPredicted RBP21.3■■□□□ 1
CCDC113-204ENST00000566498 ADGRD2Q7Z7M1 963 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 FOXD4L4Q8WXT5 416 aaPredicted RBP21.3■■□□□ 1
CCDC113-204ENST00000566498 TMEM169Q96HH4 297 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 TCF25Q9BQ70 676 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 ADPGKQ9BRR6 497 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 NXF3Q9H4D5 531 aaKnown RBP21.3■■□□□ 1
CCDC113-204ENST00000566498 KMT5AQ9NQR1 393 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 DNAJB4Q9UDY4 337 aa21.3■■□□□ 1
CCDC113-204ENST00000566498 CARNS1A5YM72 827 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 TTLL13PA6NNM8 815 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 PER2O15055 1255 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 DDHD2O94830 711 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 MLH1P40692 756 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 SLC12A3P55017 1021 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 BMS1Q14692 1282 aaKnown RBP21.29■■□□□ 1
CCDC113-204ENST00000566498 KARSQ15046 597 aaKnown RBP21.29■■□□□ 1
CCDC113-204ENST00000566498 PTPAQ15257 358 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 LEXMQ3ZCV2 418 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 SPECC1Q5M775 1068 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 PLPP4Q5VZY2 271 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 DAW1Q8N136 415 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 CCDC113Q9H0I3 377 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 C17orf75Q9HAS0 396 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 NGRNQ9NPE2 291 aaKnown RBP21.29■■□□□ 1
CCDC113-204ENST00000566498 KLK14Q9P0G3 267 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 KCNG1Q9UIX4 513 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 FAN1Q9Y2M0 1017 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 GIT1Q9Y2X7 761 aa21.29■■□□□ 1
CCDC113-204ENST00000566498 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
CCDC113-204ENST00000566498 GUCY2CP25092 1073 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 CA8P35219 290 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 ADAM15Q13444 863 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 EPSTI1Q96J88 318 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 ZFP42Q96MM3 310 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 UHRF1Q96T88 793 aaPredicted RBP21.28■■□□□ 1
CCDC113-204ENST00000566498 PDZD7Q9H5P4 517 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 KCND2Q9NZV8 630 aa21.28■■□□□ 1
CCDC113-204ENST00000566498 SRPRBQ9Y5M8 271 aaKnown RBP21.28■■□□□ 1
CCDC113-204ENST00000566498 ATG2AQ2TAZ0 1938 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 NPHP3-ACAD11A0A0J9YXS1 232 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 LINC01565O15544 149 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 CXCL14O95715 111 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 PDIA4P13667 645 aaKnown RBP21.27■■□□□ 1
CCDC113-204ENST00000566498 SLC11A1P49279 550 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 NDUFV1P49821 464 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 SMTNP53814 917 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 CTC1Q2NKJ3 1217 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 NT5DC1Q5TFE4 455 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 ATF7IP2Q5U623 682 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.27■■□□□ 1
CCDC113-204ENST00000566498 IGSF21Q96ID5 467 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 CLIC6Q96NY7 704 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 USP28Q96RU2 1077 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 CCSER1Q9C0I3 900 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 TMEM134Q9H6X4 195 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 MIOSQ9NXC5 875 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 TFIP11Q9UBB9 837 aaKnown RBP21.27■■□□□ 1
CCDC113-204ENST00000566498 CCDC39Q9UFE4 941 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 FBXO2Q9UK22 296 aaPredicted RBP21.27■■□□□ 1
CCDC113-204ENST00000566498 VCANP13611 3396 aa21.27■■□□□ 1
CCDC113-204ENST00000566498 FSCN2O14926 492 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 SLC16A4O15374 487 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 NR1I2O75469 434 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 KRT18P05783 430 aaKnown RBP21.26■□□□□ 0.99
CCDC113-204ENST00000566498 PLCG1P19174 1290 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 LTBRP36941 435 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 SCNN1GP51170 649 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 DLX2Q07687 328 aaPredicted RBP21.26■□□□□ 0.99
CCDC113-204ENST00000566498 MAPK7Q13164 816 aa21.26■□□□□ 0.99
CCDC113-204ENST00000566498 COL19A1Q14993 1142 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms