RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
PALB2-204ENST00000566069 PHC1P78364 1004 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 ADCY1Q08828 1119 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 LRRC32Q14392 662 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 DGKDQ16760 1214 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 GPR158Q5T848 1215 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 ESRP1Q6NXG1 681 aaKnown RBP4.84□□□□□ -1.63
PALB2-204ENST00000566069 KCNV1Q6PIU1 500 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 OR5AN1Q8NGI8 311 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 CPT1CQ8TCG5 803 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 FAM126AQ9BYI3 521 aaPredicted RBP4.84□□□□□ -1.63
PALB2-204ENST00000566069 R3HDMLQ9H3Y0 253 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 TOMM22Q9NS69 142 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 RCAN3Q9UKA8 241 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 COL4A3BPQ9Y5P4 624 aa4.84□□□□□ -1.63
PALB2-204ENST00000566069 UBA6A0AVT1 1052 aaPredicted RBP4.83□□□□□ -1.64
PALB2-204ENST00000566069 AHRRA9YTQ3 701 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 LPXNO60711 386 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ULK1O75385 1050 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 PRLP01236 227 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 CD40P25942 277 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 LSP1P33241 339 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ZEB1P37275 1124 aaPredicted RBP4.83□□□□□ -1.64
PALB2-204ENST00000566069 FAM189BP81408 668 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 AMPD3Q01432 767 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 SLC6A3Q01959 620 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 STAT4Q14765 748 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 PTPROQ16827 1216 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 STRIP1Q5VSL9 837 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
PALB2-204ENST00000566069 Q6YL49 198 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 CMTM4Q8IZR5 234 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ZNF610Q8N9Z0 462 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 SLC5A5Q92911 643 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 HAPLN2Q9GZV7 340 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 ZMAT4Q9H898 229 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 PCDH12Q9NPG4 1184 aa4.83□□□□□ -1.64
PALB2-204ENST00000566069 USP36Q9P275 1121 aaKnown RBP4.83□□□□□ -1.64
PALB2-204ENST00000566069 GPR39O43194 453 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 IPO13O94829 963 aaKnown RBP4.82□□□□□ -1.64
PALB2-204ENST00000566069 JUNP05412 331 aaKnown RBP4.82□□□□□ -1.64
PALB2-204ENST00000566069 HNRNPLP14866 589 aaKnown RBP eCLIP4.82□□□□□ -1.64
PALB2-204ENST00000566069 HK1P19367 917 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 CD38P28907 300 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 ID4P47928 161 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 ROM1Q03395 351 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 SPIDRQ14159 915 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 TERF2Q15554 542 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 DDB1Q16531 1140 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 TTC38Q5R3I4 469 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 RNF219Q5W0B1 726 aaPredicted RBP4.82□□□□□ -1.64
PALB2-204ENST00000566069 SPATS2Q86XZ4 545 aaKnown RBP4.82□□□□□ -1.64
PALB2-204ENST00000566069 C7orf31Q8N865 590 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 ATL2Q8NHH9 583 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 WDR66Q8TBY9 1149 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 MAML3Q96JK9 1138 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 WDR92Q96MX6 357 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 ATP8A1Q9Y2Q0 1164 aa4.82□□□□□ -1.64
PALB2-204ENST00000566069 A0A0A6YYK5 440 aaPredicted RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 ZNF185O15231 689 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 SCAF4O95104 1147 aaKnown RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 CFBP00751 764 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 IBSPP21815 317 aaPredicted RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 KIR2DL3P43628 341 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 SESN3P58005 492 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 TMPRSS15P98073 1019 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 TAP1Q03518 808 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 DCAF17Q5H9S7 520 aaPredicted RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 DDX42Q86XP3 938 aaKnown RBP eCLIP4.81□□□□□ -1.64
PALB2-204ENST00000566069 PHYKPLQ8IUZ5 450 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 RTF1Q92541 710 aaKnown RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 GPATCH3Q96I76 525 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 ENKD1Q9H0I2 346 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 SERHL2Q9H4I8 314 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 KCMF1Q9P0J7 381 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 DKK2Q9UBU2 259 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 DNAI1Q9UI46 699 aa4.81□□□□□ -1.64
PALB2-204ENST00000566069 EPN1Q9Y6I3 576 aaPredicted RBP4.81□□□□□ -1.64
PALB2-204ENST00000566069 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 FAM214AQ32MH5 1076 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 BROXQ5VW32 411 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 KRT40Q6A162 431 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 SLFN12LQ6IEE8 588 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 LHFPL2Q6ZUX7 228 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 HDGFL2Q7Z4V5 671 aaPredicted RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 APBB1IPQ7Z5R6 666 aaPredicted RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 LILRA3Q8N6C8 439 aaPredicted RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 DYDC2Q96IM9 177 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 WDR11Q9BZH6 1224 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 CYP4F11Q9HBI6 524 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 NCDNQ9UBB6 729 aa4.8□□□□□ -1.64
PALB2-204ENST00000566069 NOP58Q9Y2X3 529 aaKnown RBP4.8□□□□□ -1.64
PALB2-204ENST00000566069 TMEM200CA6NKL6 621 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms