RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ITGB1P05556 798 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 PRKCBP05771 671 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 ITGA4P13612 1032 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 NPTX2P47972 431 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 PRPF4BQ13523 1007 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 SKIV2LQ15477 1246 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 NOMO2Q5JPE7 1267 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 CCDC73Q6ZRK6 1079 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 PDILTQ8N807 584 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 SPPL3Q8TCT6 385 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 NTPCRQ9BSD7 190 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 KIFC3Q9BVG8 833 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 HCSTQ9UBK5 93 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 IPPQ9Y573 584 aa15.24■□□□□ 0.03
HERPUD1-210ENST00000565966 UNC80Q8N2C7 3258 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 PHLPP2Q6ZVD8 1323 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 CITO14578 2027 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 N4BP3O15049 544 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 LIG1P18858 919 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 STAT6P42226 847 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 UBE3AQ05086 875 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 KCNT2Q6UVM3 1135 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 THNSL1Q8IYQ7 743 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 HACE1Q8IYU2 909 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 URGCPQ8TCY9 931 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 ZNF558Q96NG5 402 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 REEP2Q9BRK0 252 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 SCAND2PQ9GZW5 306 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 KMT5AQ9NQR1 393 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 PRDM6Q9NQX0 595 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 ODF2LQ9ULJ1 636 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
HERPUD1-210ENST00000565966 CARNS1A5YM72 827 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 FGF18O76093 207 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 NPTXRO95502 500 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 PLS3P13797 630 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 PPM1AP35813 382 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 ALDH7A1P49419 539 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 SMTNP53814 917 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 CAMK1Q14012 370 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 GIT2Q14161 759 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 E2F4Q16254 413 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 LARSQ9P2J5 1176 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 HES2Q9Y543 173 aa15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-210ENST00000565966 MYMKA6NI61 221 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 DNAJB1P25685 340 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 BCAR1P56945 870 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 ADALQ6DHV7 355 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 DHX58Q96C10 678 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 NXF3Q9H4D5 531 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 NRDE2Q9H7Z3 1164 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 SPG21Q9NZD8 308 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 THEGQ9P2T0 379 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 COG5Q9UP83 839 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
HERPUD1-210ENST00000565966 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 INPPL1O15357 1258 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 SLC16A4O15374 487 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 FAM13AO94988 1023 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 EDN1P05305 212 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 CMA1P23946 247 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 ZNF131P52739 623 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 KRT17Q04695 432 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 NT5DC1Q5TFE4 455 aa15.2■□□□□ 0.02
HERPUD1-210ENST00000565966 ATF7IP2Q5U623 682 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms