RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PLCB3Q01970 1234 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 MCM6Q14566 821 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 LONRF3Q496Y0 759 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 KCNT2Q6UVM3 1135 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 GPBP1Q86WP2 473 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 PHF6Q8IWS0 365 aaKnown RBP eCLIP17■□□□□ 0.31
COMMD4-212ENST00000565517 URGCPQ8TCY9 931 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 KCNN1Q92952 543 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 TBC1D13Q9NVG8 400 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 LARSQ9P2J5 1176 aaKnown RBP17■□□□□ 0.31
COMMD4-212ENST00000565517 CFAP45Q9UL16 551 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 LZTS1Q9Y250 596 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 GIT1Q9Y2X7 761 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 SFI1A8K8P3 1242 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 FGF18O76093 207 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 NPTXRO95502 500 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 BRD1O95696 1058 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 SCP2P22307 547 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 RAD51AP2Q09MP3 1159 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 CAMK1Q14012 370 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 THNSL1Q8IYQ7 743 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 POF1BQ8WVV4 589 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 PDZD7Q9H5P4 517 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 NSUN3Q9H649 340 aaKnown RBP16.99■□□□□ 0.31
COMMD4-212ENST00000565517 SPG21Q9NZD8 308 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 COG5Q9UP83 839 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 TCHHQ07283 1943 aa16.99■□□□□ 0.31
COMMD4-212ENST00000565517 TTLL13PA6NNM8 815 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 H0YCG3 227 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 CUTAO60888 179 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 EDN1P05305 212 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 DNAJB1P25685 340 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 ZNF131P52739 623 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 BCAR1P56945 870 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 GIT2Q14161 759 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 SKIV2LQ15477 1246 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 PDE12Q6L8Q7 609 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 APBB1IPQ7Z5R6 666 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 CDR2LQ86X02 465 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 NRDE2Q9H7Z3 1164 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 PUF60Q9UHX1 559 aaKnown RBP16.98■□□□□ 0.31
COMMD4-212ENST00000565517 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 HES2Q9Y543 173 aa16.98■□□□□ 0.31
COMMD4-212ENST00000565517 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 ARL5CA6NH57 179 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 SLC16A4O15374 487 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 LIG1P18858 919 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 KRT17Q04695 432 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 ATF7IP2Q5U623 682 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 TAS1R3Q7RTX0 852 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 TMEM161BQ8NDZ6 487 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 MRPS27Q92552 414 aaKnown RBP16.97■□□□□ 0.31
COMMD4-212ENST00000565517 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
COMMD4-212ENST00000565517 MRPL4Q9BYD3 311 aaKnown RBP16.97■□□□□ 0.31
COMMD4-212ENST00000565517 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
COMMD4-212ENST00000565517 PARVGQ9HBI0 331 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 PRDM6Q9NQX0 595 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 RCOR1Q9UKL0 485 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
COMMD4-212ENST00000565517 UNC80Q8N2C7 3258 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 NCK2O43639 380 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 FAM13AO94988 1023 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 GALTP07902 379 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 MAPTP10636 758 aaKnown RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 AFF1P51825 1210 aaKnown RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 TCEAL5Q5H9L2 206 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 HLA-CQ95604 372 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 FAM193BQ96PV7 902 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-212ENST00000565517 GAD1Q99259 594 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 TMEM175Q9BSA9 504 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 PTPRHQ9HD43 1115 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 TLR9Q9NR96 1032 aa16.96■□□□□ 0.31
COMMD4-212ENST00000565517 BRWD1Q9NSI6 2320 aa16.95■□□□□ 0.3
COMMD4-212ENST00000565517 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 526.8 ms