RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ABHD16AO95870 558 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 HSP90B1P14625 803 aaKnown RBP6.15□□□□□ -1.42
CHD9-212ENST00000564641 CASRP41180 1078 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 TAP1Q03518 808 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 PPARAQ07869 468 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 SEPT7Q16181 437 aaKnown RBP6.15□□□□□ -1.42
CHD9-212ENST00000564641 PLEKHG4Q58EX7 1191 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 C19orf54Q5BKX5 351 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 Q6ZPA2 131 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 KIAA0907Q7Z7F0 614 aaPredicted RBP6.15□□□□□ -1.42
CHD9-212ENST00000564641 RASSF3Q86WH2 238 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 RPUSD2Q8IZ73 545 aaKnown RBP6.15□□□□□ -1.42
CHD9-212ENST00000564641 CPT1CQ8TCG5 803 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 ZG16BQ96DA0 208 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 SLC46A2Q9BY10 475 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 EIF2B4Q9UI10 523 aaKnown RBP6.15□□□□□ -1.42
CHD9-212ENST00000564641 MAPRE3Q9UPY8 281 aa6.15□□□□□ -1.42
CHD9-212ENST00000564641 PRR5-ARHGAP8B1AHC4 643 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 SCAF4O95104 1147 aaKnown RBP6.14□□□□□ -1.43
CHD9-212ENST00000564641 GASTP01350 101 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 LTA4HP09960 611 aaKnown RBP6.14□□□□□ -1.43
CHD9-212ENST00000564641 KRT4P19013 534 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 MANFP55145 182 aaKnown RBP6.14□□□□□ -1.43
CHD9-212ENST00000564641 MGAT5Q09328 741 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 FAM214AQ32MH5 1076 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 BROXQ5VW32 411 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 KCNV1Q6PIU1 500 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 PROKR1Q8TCW9 393 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 AGAP2Q99490 1192 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 NDC1Q9BTX1 674 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 KCNH6Q9H252 994 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 EMC7Q9NPA0 242 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 NOC2LQ9Y3T9 749 aaKnown RBP6.14□□□□□ -1.43
CHD9-212ENST00000564641 PPP2R3BQ9Y5P8 575 aa6.14□□□□□ -1.43
CHD9-212ENST00000564641 MRPL42Q9Y6G3 142 aaKnown RBP6.14□□□□□ -1.43
CHD9-212ENST00000564641 GAGE12BA1L429 117 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 GCP02774 474 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 LAG3P18627 525 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 MGAT1P26572 445 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 DHCR24Q15392 516 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 TIGD2Q4W5G0 525 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 GJC2Q5T442 439 aaPredicted RBP6.13□□□□□ -1.43
CHD9-212ENST00000564641 DRICH1Q6PGQ1 229 aaPredicted RBP6.13□□□□□ -1.43
CHD9-212ENST00000564641 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 MSL3Q8N5Y2 521 aaKnown RBP6.13□□□□□ -1.43
CHD9-212ENST00000564641 SLC5A5Q92911 643 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 CDC5LQ99459 802 aaKnown RBP6.13□□□□□ -1.43
CHD9-212ENST00000564641 PACSIN3Q9UKS6 424 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 TMPRSS11EQ9UL52 423 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 HS3ST4Q9Y661 456 aa6.13□□□□□ -1.43
CHD9-212ENST00000564641 GSG1L2A8MUP6 293 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 B5MCH6 92 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 B3GALT2O43825 422 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 NANOS3P60323 173 aaKnown RBP6.12□□□□□ -1.43
CHD9-212ENST00000564641 UBE3CQ15386 1083 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 ATP13A4Q4VNC1 1196 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 PDZD4Q76G19 769 aaPredicted RBP6.12□□□□□ -1.43
CHD9-212ENST00000564641 MYEOVQ96EZ4 313 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 CRAMP1Q96RY5 1269 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 ANO3Q9BYT9 981 aa6.12□□□□□ -1.43
CHD9-212ENST00000564641 CPEB1Q9BZB8 566 aaKnown RBP6.12□□□□□ -1.43
CHD9-212ENST00000564641 EVLQ9UI08 416 aaPredicted RBP6.12□□□□□ -1.43
CHD9-212ENST00000564641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.11□□□□□ -1.43
CHD9-212ENST00000564641 ENPP3O14638 875 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 PDE8AO60658 829 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 APBA1Q02410 837 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 ZNF575Q86XF7 245 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 SLC41A1Q8IVJ1 513 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 SNX33Q8WV41 574 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 LEO1Q8WVC0 666 aaPredicted RBP6.11□□□□□ -1.43
CHD9-212ENST00000564641 USP7Q93009 1102 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
CHD9-212ENST00000564641 CDY2AQ9Y6F7 541 aa6.11□□□□□ -1.43
CHD9-212ENST00000564641 RNASET2O00584 256 aaKnown RBP6.1□□□□□ -1.43
CHD9-212ENST00000564641 ZEB2O60315 1214 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 PRAMEF4O60810 478 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 PHF2O75151 1096 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 ULK1O75385 1050 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 CFBP00751 764 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 CLEC2LP0C7M8 214 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 NR4A1P22736 598 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 SESN3P58005 492 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
CHD9-212ENST00000564641 GDF7Q7Z4P5 450 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
CHD9-212ENST00000564641 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 PLXDC1Q8IUK5 500 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 LYSMD2Q8IV50 215 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 ACAP3Q96P50 834 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
CHD9-212ENST00000564641 A0A087X0B3 334 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
CHD9-212ENST00000564641 BPIP17213 487 aa6.09□□□□□ -1.43
CHD9-212ENST00000564641 FSTL1Q12841 308 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms