RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 GIT1Q9Y2X7 761 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 IPPQ9Y573 584 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 ATP2B1P20020 1258 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 GLRA2P23416 452 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 CA8P35219 290 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 GUCY1B3Q02153 619 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 GNL2Q13823 731 aaKnown RBP16.64■□□□□ 0.25
SPG7-210ENST00000564409 HAUS3Q68CZ6 603 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 SLC27A1Q6PCB7 646 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 TMEM173Q86WV6 379 aaPredicted RBP16.64■□□□□ 0.25
SPG7-210ENST00000564409 NOSTRINQ8IVI9 506 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 ASAP3Q8TDY4 903 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 POLR3FQ9H1D9 316 aaPredicted RBP16.64■□□□□ 0.25
SPG7-210ENST00000564409 PRMT7Q9NVM4 692 aaPredicted RBP16.64■□□□□ 0.25
SPG7-210ENST00000564409 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 MUC6Q6W4X9 2439 aa16.64■□□□□ 0.25
SPG7-210ENST00000564409 ZNF318Q5VUA4 2279 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 A0A1B0GUA9 196 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 ARL5CA6NH57 179 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 USO1O60763 962 aaKnown RBP16.63■□□□□ 0.25
SPG7-210ENST00000564409 DDHD2O94830 711 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
SPG7-210ENST00000564409 ZXDAP98168 799 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 DSC1Q08554 894 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 PTPN14Q15678 1187 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 AMHR2Q16671 573 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 FAM187BQ17R55 369 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 TRIM67Q6ZTA4 783 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 C2orf40Q9H1Z8 148 aa16.63■□□□□ 0.25
SPG7-210ENST00000564409 MRPL17Q9NRX2 175 aaKnown RBP16.63■□□□□ 0.25
SPG7-210ENST00000564409 NRP1O14786 923 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 C1RP00736 705 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 POMCP01189 267 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPG7-210ENST00000564409 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
SPG7-210ENST00000564409 PDIA5Q14554 519 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 PPP2R5AQ15172 486 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 ZNF174Q15697 407 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 ATAT1Q5SQI0 421 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 CDCA2Q69YH5 1023 aaPredicted RBP16.62■□□□□ 0.25
SPG7-210ENST00000564409 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 ZBTB8OSQ8IWT0 167 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 COLGALT2Q8IYK4 626 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 GPR65Q8IYL9 337 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 BCL7CQ8WUZ0 217 aaPredicted RBP16.62■□□□□ 0.25
SPG7-210ENST00000564409 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 GAD1Q99259 594 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
SPG7-210ENST00000564409 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
SPG7-210ENST00000564409 ARHGEF35A5YM69 484 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 TMEM221A6NGB7 291 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 LRRIQ4A6NIV6 560 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 M0R296 226 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 LAD1O00515 517 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 B4GALT3O60512 393 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 MED24O75448 989 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 SOD2P04179 222 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 CYP11B2P19099 503 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 SIGLEC14Q08ET2 396 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 PTPN21Q16825 1174 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 KIAA1841Q6NSI8 718 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 CABP7Q86V35 215 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 AUTS2Q8WXX7 1259 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 KIF2CQ99661 725 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 VN1R3Q9BXE9 311 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 FZD8Q9H461 694 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 SFXN1Q9H9B4 322 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 USTQ9Y2C2 406 aa16.61■□□□□ 0.25
SPG7-210ENST00000564409 LILRB3O75022 631 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 URODP06132 367 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 KLRC2P26717 231 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 MLH1P40692 756 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
SPG7-210ENST00000564409 RABEP1Q15276 862 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 MAPK6Q16659 721 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 KLHL5Q96PQ7 755 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 PRRX2Q99811 253 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 HERC2P3Q9BVR0 1158 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 APOL5Q9BWW9 433 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
SPG7-210ENST00000564409 MTCL1Q9Y4B5 1905 aaKnown RBP16.6■□□□□ 0.25
SPG7-210ENST00000564409 N4BP3O15049 544 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 ST18O60284 1047 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 EFEMP2O95967 443 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 ADH1AP07327 375 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 CNPP09543 421 aaKnown RBP16.59■□□□□ 0.25
SPG7-210ENST00000564409 EPCAMP16422 314 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 NAMPTP43490 491 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms