RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 TECTAO75443 2155 aa19.12■□□□□ 0.65
VPS9D1-203ENST00000563798 A0A1B0GUA9 196 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 ARL5CA6NH57 179 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 NRP1O14786 923 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 MED24O75448 989 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 OR52Z1P0C646 297 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 RPA1P27694 616 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 TRAPPC10P48553 1259 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 RBM25P49756 843 aaKnown RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 GUCY1B3Q02153 619 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 COLGALT2Q8IYK4 626 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 RNF168Q8IYW5 571 aaPredicted RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 MCPH1Q8NEM0 835 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 AUTS2Q8WXX7 1259 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 CCDC43Q96MW1 224 aaKnown RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 FAM193BQ96PV7 902 aaPredicted RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 POLR3FQ9H1D9 316 aaPredicted RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 GIT1Q9Y2X7 761 aa19.11■□□□□ 0.65
VPS9D1-203ENST00000563798 POMCP01189 267 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 MTHFRP42898 656 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 FAM187BQ17R55 369 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 CDCA2Q69YH5 1023 aaPredicted RBP19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 CPB2Q96IY4 423 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 PRIMPOLQ96LW4 560 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 GAD1Q99259 594 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 APOL5Q9BWW9 433 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 MARCH5Q9NX47 278 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 NR2E1Q9Y466 385 aa19.1■□□□□ 0.65
VPS9D1-203ENST00000563798 A0A087WWV3 80 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 TMEM221A6NGB7 291 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 M0R296 226 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 USO1O60763 962 aaKnown RBP19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 SOD2P04179 222 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 EPCAMP16422 314 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 ATP2B1P20020 1258 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 PTPN21Q16825 1174 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 KIAA1841Q6NSI8 718 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 SLC27A1Q6PCB7 646 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 NOSTRINQ8IVI9 506 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 HACE1Q8IYU2 909 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 C4orf32Q8N8J7 132 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 GSTCDQ8NEC7 633 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 ERMNQ8TAM6 284 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 RIPOR3Q96MK2 946 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 KLHL5Q96PQ7 755 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 EMILIN2Q9BXX0 1053 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 FZD8Q9H461 694 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 POMKQ9H5K3 350 aa19.09■□□□□ 0.65
VPS9D1-203ENST00000563798 B4GALT5O43286 388 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 CNPP09543 421 aaKnown RBP19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 U2AF2P26368 475 aaKnown RBP eCLIP19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 MLH1P40692 756 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 FXR2P51116 673 aaKnown RBP eCLIP19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 SIGLEC14Q08ET2 396 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 ZNF174Q15697 407 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 C8orf34Q49A92 452 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 TTC38Q5R3I4 469 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 GPR65Q8IYL9 337 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 TMEM87AQ8NBN3 555 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 HERC2P3Q9BVR0 1158 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 GPRC5CQ9NQ84 441 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 MRPL17Q9NRX2 175 aaKnown RBP19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 PRMT7Q9NVM4 692 aaPredicted RBP19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 MIOSQ9NXC5 875 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 SSX2IPQ9Y2D8 614 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 HES2Q9Y543 173 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 ZNF318Q5VUA4 2279 aa19.08■□□□□ 0.64
VPS9D1-203ENST00000563798 C1RP00736 705 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 CYP11B2P19099 503 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 CA8P35219 290 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 SCNN1GP51170 649 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 CLCN4P51793 760 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 ATAT1Q5SQI0 421 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 PADI6Q6TGC4 694 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 ZFP42Q96MM3 310 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 TRIM6Q9C030 488 aaPredicted RBP19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 C2orf40Q9H1Z8 148 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 NXF3Q9H4D5 531 aaKnown RBP19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 RXFP1Q9HBX9 757 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 CDH22Q9UJ99 828 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 USTQ9Y2C2 406 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 MUC6Q6W4X9 2439 aa19.07■□□□□ 0.64
VPS9D1-203ENST00000563798 PDIA5Q14554 519 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 RARS2Q5T160 578 aaKnown RBP19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 KIAA0319Q5VV43 1072 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 HAUS3Q68CZ6 603 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 POTEGQ6S5H5 508 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 ZDHHC14Q8IZN3 488 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 C12orf76Q8N812 135 aaPredicted RBP19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 FAM184AQ8NB25 1140 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 ASIC4Q96FT7 647 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 FBXL18Q96ME1 805 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 RPS6KC1Q96S38 1066 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 RHOBTB2Q9BYZ6 727 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 SFXN1Q9H9B4 322 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 CHST7Q9NS84 486 aa19.06■□□□□ 0.64
VPS9D1-203ENST00000563798 NOL7Q9UMY1 257 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms