RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-208	ENST00000563783	PDIA5	Q14554	519 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	ZNF174	Q15697	407 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	FAM187B	Q17R55	369 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	LONRF3	Q496Y0	759 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	PPFIBP1	Q86W92	1011 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	ZNF280B	Q86YH2	543 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	NECTIN4	Q96NY8	510 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	GIT1	Q9Y2X7	761 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783	PIEZO1	Q92508	2521 aa		27.91	■■■□□ 2.06
SPG7-208	ENST00000563783		A0A1B0GUA9	196 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	LAD1	O00515	517 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	ST18	O60284	1047 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	C4orf32	Q8N8J7	132 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	RAB34	Q9BZG1	259 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	C2orf40	Q9H1Z8	148 aa		27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	PRMT7	Q9NVM4	692 aa	Predicted RBP	27.9	■■■□□ 2.06
SPG7-208	ENST00000563783	DDHD2	O94830	711 aa		27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	DSC1	Q08554	894 aa		27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	SLC27A1	Q6PCB7	646 aa		27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	BCL7C	Q8WUZ0	217 aa	Predicted RBP	27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	EIF2A	Q9BY44	585 aa	Known RBP	27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	FAN1	Q9Y2M0	1017 aa		27.89	■■■□□ 2.06
SPG7-208	ENST00000563783	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	FAM86C2P	A6NEL3	165 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	ARL5C	A6NH57	179 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	B4GALT3	O60512	393 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	CYP11B2	P19099	503 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	CES5A	Q6NT32	575 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	POTEG	Q6S5H5	508 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	ZBTB8OS	Q8IWT0	167 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	TRIM6	Q9C030	488 aa	Predicted RBP	27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	GBP3	Q9H0R5	595 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	ADAM7	Q9H2U9	754 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	SSX2IP	Q9Y2D8	614 aa		27.88	■■■□□ 2.05
SPG7-208	ENST00000563783	PLA2G5	P39877	138 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	PPP2R5A	Q15172	486 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	PTPN14	Q15678	1187 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	LLGL2	Q6P1M3	1020 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	PADI6	Q6TGC4	694 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	COLGALT2	Q8IYK4	626 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	GPR65	Q8IYL9	337 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	IGSF22	Q8N9C0	903 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	TMEM87A	Q8NBN3	555 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	CPB2	Q96IY4	423 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	VN1R3	Q9BXE9	311 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	FZD8	Q9H461	694 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	MUTYH	Q9UIF7	546 aa		27.87	■■■□□ 2.05
SPG7-208	ENST00000563783	ARHGEF35	A5YM69	484 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	LRRIQ4	A6NIV6	560 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	EFEMP2	O95967	443 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	PRPH	P41219	470 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	AFF1	P51825	1210 aa	Known RBP	27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	EDA	Q92838	391 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	GAD1	Q99259	594 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	KCNH6	Q9H252	994 aa		27.86	■■■□□ 2.05
SPG7-208	ENST00000563783	ZDBF2	Q9HCK1	2354 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	NRP1	O14786	923 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	NR1I2	O75469	434 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	C1R	P00736	705 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	POMC	P01189	267 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	MTHFR	P42898	656 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	NAMPT	P43490	491 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	RNF168	Q8IYW5	571 aa	Predicted RBP	27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	SLC22A17	Q8WUG5	538 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	EMILIN2	Q9BXX0	1053 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	RNF39	Q9H2S5	420 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	UPF2	Q9HAU5	1272 aa	Known RBP	27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	GPRC5C	Q9NQ84	441 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	LRWD1	Q9UFC0	647 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	RAPGEFL1	Q9UHV5	662 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	NR2E1	Q9Y466	385 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	DENND4A	Q7Z401	1863 aa		27.85	■■■□□ 2.05
SPG7-208	ENST00000563783	LILRB3	O75022	631 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	SOD2	P04179	222 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	MLH1	P40692	756 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	MCM2	P49736	904 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	TOB1	P50616	345 aa	Predicted RBP	27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	BMP8A	Q7Z5Y6	402 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	KCTD17	Q8N5Z5	321 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	KIFAP3	Q92845	792 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	RIPOR3	Q96MK2	946 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	HERC2P3	Q9BVR0	1158 aa		27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	NXF3	Q9H4D5	531 aa	Known RBP	27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	MRPL17	Q9NRX2	175 aa	Known RBP	27.84	■■■□□ 2.05
SPG7-208	ENST00000563783	MTCL1	Q9Y4B5	1905 aa	Known RBP	27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	N4BP3	O15049	544 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	B4GALT5	O43286	388 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	CCT6A	P40227	531 aa	Known RBP	27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	EFNA5	P52803	228 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	GRIK3	Q13003	919 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	PTGDR	Q13258	359 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	MAPK6	Q16659	721 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	MARCH5	Q9NX47	278 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783	MYO10	Q9HD67	2058 aa		27.83	■■■□□ 2.05
SPG7-208	ENST00000563783		A0A087WWV3	80 aa		27.82	■■■□□ 2.04
SPG7-208	ENST00000563783	RILPL1	Q5EBL4	403 aa		27.82	■■■□□ 2.04
SPG7-208	ENST00000563783	KIAA1841	Q6NSI8	718 aa		27.82	■■■□□ 2.04
SPG7-208	ENST00000563783	GSTCD	Q8NEC7	633 aa		27.82	■■■□□ 2.04
SPG7-208	ENST00000563783	FAM122A	Q96E09	287 aa		27.82	■■■□□ 2.04
SPG7-208	ENST00000563783	RPGRIP1	Q96KN7	1286 aa		27.82	■■■□□ 2.04

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