RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MTAPQ13126 283 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 TARBP2Q15633 366 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 ZBTB41Q5SVQ8 909 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 TRMT1LQ7Z2T5 733 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 MB21D2Q8IYB1 491 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 CELF5Q8N6W0 485 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 CRYGNQ8WXF5 182 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 MBOAT7Q96N66 472 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 CEP89Q96ST8 783 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 LZTS2Q9BRK4 669 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 CHST7Q9NS84 486 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 DPP7Q9UHL4 492 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 CDH7Q9ULB5 785 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 ZMIZ1Q9ULJ6 1067 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 FAN1Q9Y2M0 1017 aa8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 KIF26AQ9ULI4 1882 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-206ENST00000563343 A0A087WZ62 844 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 ERICH2A1L162 156 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 E7EWF7 191 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 TGM5O43548 720 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 ZMYND10O75800 440 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 C1QTNF9P0C862 333 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 SKIP12755 728 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 FSHRP23945 695 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 TMOD1P28289 359 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 GLUD2P49448 558 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 LIMK1P53667 647 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 NTHL1P78549 312 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 PFKPQ01813 784 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 TRDNQ13061 729 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 TWF2Q6IBS0 349 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 ZNF746Q6NUN9 644 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 TPRG1Q6ZUI0 275 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 MRPL10Q7Z7H8 261 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 PALB2Q86YC2 1186 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 CKAP2LQ8IYA6 745 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 COLGALT2Q8IYK4 626 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 KDF1Q8NAX2 398 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 CTCFLQ8NI51 663 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 ITFG1Q8TB96 612 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 DDX1Q92499 740 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 FGF13Q92913 245 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 NELL2Q99435 816 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 FDXACB1Q9BRP7 624 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 CHRDQ9H2X0 955 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 OSBPL3Q9H4L5 887 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 DIAPH3Q9NSV4 1193 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 GABBR1Q9UBS5 961 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 SSX2IPQ9Y2D8 614 aa8.73□□□□□ -1.01
HERPUD1-206ENST00000563343 ADAMTS20P59510 1910 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 IGKV6-21A0A0C4DH24 114 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 IPO5O00410 1097 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 HRO43593 1189 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 OATP04181 439 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RXRAP19793 462 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 GNAQP50148 359 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RAB27AP51159 221 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 DSC1Q08554 894 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 ADCY1Q08828 1119 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 UGCGQ16739 394 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 UBXN11Q5T124 520 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 WWC2Q6AWC2 1192 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 ELMSAN1Q6PJG2 1045 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 MTSS1LQ765P7 747 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 GRASPQ7Z6J2 395 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 TEX2Q8IWB9 1127 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PLEKHM2Q8IWE5 1019 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 GPR65Q8IYL9 337 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PHKBQ93100 1093 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 FAM167AQ96KS9 214 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PLA2G2FQ9BZM2 168 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 LNPKQ9C0E8 428 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RSAD1Q9HA92 442 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RXFP3Q9NSD7 469 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 AGPAT5Q9NUQ2 364 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 FNIP2Q9P278 1114 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 RAB23Q9ULC3 237 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 WASF3Q9UPY6 502 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PIN4Q9Y237 131 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PRG3Q9Y2Y8 225 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PCDHB2Q9Y5E7 798 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 PCDHA10Q9Y5I2 948 aa8.72□□□□□ -1.01
HERPUD1-206ENST00000563343 SOBPA7XYQ1 873 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 HIP1O00291 1037 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 ADAMTS3O15072 1205 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 NCAM2O15394 837 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 STBD1O95210 358 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 FOSP01100 380 aaPredicted RBP8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 POMCP01189 267 aa8.71□□□□□ -1.02
HERPUD1-206ENST00000563343 PSAPP07602 524 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms