RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HSD17B4P51659 736 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 PLTPP55058 493 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 GTF2BQ00403 316 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 SLC30A10Q6XR72 485 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 CPLX4Q7Z7G2 160 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 FAM71AQ8IYT1 594 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 SLC20A1Q8WUM9 679 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 CD101Q93033 1021 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 CHMP6Q96FZ7 201 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 YY1AP1Q9H869 796 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 A1CFQ9NQ94 594 aaKnown RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 GRHL1Q9NZI5 618 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 SNX24Q9Y343 169 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 RPTORQ8N122 1335 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 CYP1A2P05177 515 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 DRD4P21917 467 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 MFAP3P55082 362 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 DLG4P78352 724 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 PPP3CAQ08209 521 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 LDHDQ86WU2 507 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 C12orf50Q8NA57 414 aaPredicted RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 ACER1Q8TDN7 264 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 FAM151AQ8WW52 585 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 GLG1Q92896 1179 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 RNF25Q96BH1 459 aaPredicted RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 PRMT6Q96LA8 375 aaPredicted RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 ROPN1BQ9BZX4 212 aaPredicted RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 KDM4CQ9H3R0 1056 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 ROPN1Q9HAT0 212 aaPredicted RBP14.09□□□□□ -0.15
USB1-207ENST00000563149 HSPBP1Q9NZL4 362 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 UVRAGQ9P2Y5 699 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 ZBTB21Q9ULJ3 1066 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 PCDHA3Q9Y5H8 950 aa14.09□□□□□ -0.15
USB1-207ENST00000563149 ASAP2O43150 1006 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 RASSF9O75901 435 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 RARGP13631 454 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 COMTP21964 271 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 COILP38432 576 aaPredicted RBP14.08□□□□□ -0.16
USB1-207ENST00000563149 MXI1P50539 228 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 UBXN2AP68543 259 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 QPCTQ16769 361 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 C1orf220Q5T0J3 134 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 CCDC137Q6PK04 289 aaKnown RBP14.08□□□□□ -0.16
USB1-207ENST00000563149 ADAT2Q7Z6V5 191 aaKnown RBP14.08□□□□□ -0.16
USB1-207ENST00000563149 CCDC13Q8IYE1 715 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 SUPT20HQ8NEM7 779 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 HVCN1Q96D96 273 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 PLVAPQ9BX97 442 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 PCIF1Q9H4Z3 704 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 CCDC134Q9H6E4 229 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 NOCTQ9UK39 431 aaKnown RBP14.08□□□□□ -0.16
USB1-207ENST00000563149 GTF3C4Q9UKN8 822 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 EXOC7Q9UPT5 735 aa14.08□□□□□ -0.16
USB1-207ENST00000563149 PASKQ96RG2 1323 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 DCDC2CA8MYV0 355 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 H0YIN7 160 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 RGS16O15492 202 aaPredicted RBP14.07□□□□□ -0.16
USB1-207ENST00000563149 TBC1D12O60347 775 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 SGPL1O95470 568 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 CHRNB2P17787 502 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 GCLMP48507 274 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 RARRES1P49788 294 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 MNAT1P51948 309 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 NCKAP1LP55160 1127 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 GHRHRQ02643 423 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 RASA3Q14644 834 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 MESDQ14696 234 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
USB1-207ENST00000563149 EPS8L1Q8TE68 723 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 MAIP1Q8WWC4 291 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 KRT35Q92764 455 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 SLCO2A1Q92959 643 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 ART4Q93070 314 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 CCDC114Q96M63 670 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 MAP3K20Q9NYL2 800 aaKnown RBP14.07□□□□□ -0.16
USB1-207ENST00000563149 PNMA2Q9UL42 364 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 COQ4Q9Y3A0 265 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 ZHX2Q9Y6X8 837 aa14.07□□□□□ -0.16
USB1-207ENST00000563149 SHBGP04278 402 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 MMP10P09238 476 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 COPB2P35606 906 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 RPL21P46778 160 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 RWDD2BP57060 319 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ENPEPQ07075 957 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 TNFAIP8L3Q5GJ75 292 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 HAUS6Q7Z4H7 955 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 CCDC50Q8IVM0 306 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
USB1-207ENST00000563149 SHC3Q92529 594 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 PCDHB18PQ96TA0 734 aa14.06□□□□□ -0.16
USB1-207ENST00000563149 CBWD1Q9BRT8 395 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms