RNA–Protein interactions for RNA: ENST00000562589.5

E4F1-202, Transcript of E4F transcription factor 1, humanhuman

TSL 5

Gene E4F1, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-202ENST00000562589 HACE1Q8IYU2 909 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 URGCPQ8TCY9 931 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 SPIRE2Q8WWL2 714 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 LARP4BQ92615 738 aaKnown RBP27.68■■■□□ 2.02
E4F1-202ENST00000562589 RNF39Q9H2S5 420 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 PDZD7Q9H5P4 517 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 NSUN3Q9H649 340 aaKnown RBP27.68■■■□□ 2.02
E4F1-202ENST00000562589 TMEM134Q9H6X4 195 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 THEGQ9P2T0 379 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 ODF2LQ9ULJ1 636 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 INPP5FQ9Y2H2 1132 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 HES2Q9Y543 173 aa27.68■■■□□ 2.02
E4F1-202ENST00000562589 NPHP3-ACAD11A0A0J9YXS1 232 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 INPPL1O15357 1258 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 NPTXRO95502 500 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 EDN1P05305 212 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 LIG1P18858 919 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 PPM1AP35813 382 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 PLCB3Q01970 1234 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 ATL3Q6DD88 541 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 POF1BQ8WVV4 589 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 NXF3Q9H4D5 531 aaKnown RBP27.67■■■□□ 2.02
E4F1-202ENST00000562589 KANSL3Q9P2N6 904 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 STK17AQ9UEE5 414 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 ATG2AQ2TAZ0 1938 aa27.67■■■□□ 2.02
E4F1-202ENST00000562589 A0A0C4DFX4 3053 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 MYH11P35749 1972 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 PLXNA4Q9HCM2 1894 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 DHX8Q14562 1220 aaKnown RBP27.66■■■□□ 2.02
E4F1-202ENST00000562589 TMEM132AQ24JP5 1023 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 NT5DC1Q5TFE4 455 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 SPG21Q9NZD8 308 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 COG5Q9UP83 839 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 LZTS1Q9Y250 596 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 USP20Q9Y2K6 914 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 GIT1Q9Y2X7 761 aa27.66■■■□□ 2.02
E4F1-202ENST00000562589 CARNS1A5YM72 827 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 PBX3P40426 434 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 ALDH7A1P49419 539 aaKnown RBP27.65■■■□□ 2.02
E4F1-202ENST00000562589 AFF1P51825 1210 aaKnown RBP27.65■■■□□ 2.02
E4F1-202ENST00000562589 SMTNP53814 917 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 BCAR1P56945 870 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 RNASELQ05823 741 aaKnown RBP27.65■■■□□ 2.02
E4F1-202ENST00000562589 BECN1Q14457 450 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 TCEAL5Q5H9L2 206 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 RRAGBQ5VZM2 374 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 TAS1R3Q7RTX0 852 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 ATXN2LQ8WWM7 1075 aaKnown RBP27.65■■■□□ 2.02
E4F1-202ENST00000562589 REEP2Q9BRK0 252 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 NRDE2Q9H7Z3 1164 aa27.65■■■□□ 2.02
E4F1-202ENST00000562589 ZMYM2Q9UBW7 1377 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 ARL5CA6NH57 179 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 SLC16A4O15374 487 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 BRD1O95696 1058 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 CACNB1Q02641 598 aaPredicted RBP27.64■■■□□ 2.02
E4F1-202ENST00000562589 FOXD4L6Q3SYB3 417 aaPredicted RBP27.64■■■□□ 2.02
E4F1-202ENST00000562589 FOXD4L3Q6VB84 417 aaPredicted RBP27.64■■■□□ 2.02
E4F1-202ENST00000562589 SLC39A11Q8N1S5 342 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 ADPGKQ9BRR6 497 aa27.64■■■□□ 2.02
E4F1-202ENST00000562589 LARSQ9P2J5 1176 aaKnown RBP27.64■■■□□ 2.02
E4F1-202ENST00000562589 SPTBN5Q9NRC6 3674 aaKnown RBP27.63■■■□□ 2.01
E4F1-202ENST00000562589 ZC3H11AO75152 810 aaKnown RBP eCLIP27.63■■■□□ 2.01
E4F1-202ENST00000562589 ZNF131P52739 623 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 GIT2Q14161 759 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 ATF7IP2Q5U623 682 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 EEF1DP3Q658K8 133 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 CCDC73Q6ZRK6 1079 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 ZNF280BQ86YH2 543 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 TMEM161BQ8NDZ6 487 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 MRPS27Q92552 414 aaKnown RBP27.63■■■□□ 2.01
E4F1-202ENST00000562589 HLA-CQ95604 372 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 GAD1Q99259 594 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 APOL6Q9BWW8 343 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 CFAP45Q9UL16 551 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 BRWD1Q9NSI6 2320 aa27.63■■■□□ 2.01
E4F1-202ENST00000562589 POMCP01189 267 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 AKAP5P24588 427 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 MLH1P40692 756 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 KRT17Q04695 432 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 DCAF4L1Q3SXM0 396 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 KCNG4Q8TDN1 519 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 KCNN1Q92952 543 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 ZFP42Q96MM3 310 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 ACO2Q99798 780 aaKnown RBP27.62■■■□□ 2.01
E4F1-202ENST00000562589 MRPL4Q9BYD3 311 aaKnown RBP27.62■■■□□ 2.01
E4F1-202ENST00000562589 TLR9Q9NR96 1032 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 PUF60Q9UHX1 559 aaKnown RBP27.62■■■□□ 2.01
E4F1-202ENST00000562589 TNFSF13BQ9Y275 285 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 ZDHHC9Q9Y397 364 aa27.62■■■□□ 2.01
E4F1-202ENST00000562589 H0YCG3 227 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 B4GALT3O60512 393 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 CUTAO60888 179 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 KRT18P05783 430 aaKnown RBP27.61■■■□□ 2.01
E4F1-202ENST00000562589 GALTP07902 379 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 MAPTP10636 758 aaKnown RBP27.61■■■□□ 2.01
E4F1-202ENST00000562589 IRS1P35568 1242 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 COL19A1Q14993 1142 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 PDE12Q6L8Q7 609 aaKnown RBP27.61■■■□□ 2.01
E4F1-202ENST00000562589 GBP3Q9H0R5 595 aa27.61■■■□□ 2.01
E4F1-202ENST00000562589 PARVGQ9HBI0 331 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms