RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ZNF552Q9H707 407 aaPredicted RBP6.89□□□□□ -1.31
UBR1-203ENST00000562173 MTMR10Q9NXD2 777 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 NDOR1Q9UHB4 597 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
UBR1-203ENST00000562173 MYPNQ86TC9 1320 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 MAPK8IP3Q9UPT6 1336 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 LRRC10BA6NIK2 292 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 FAM47E-STBD1D6RA91 191 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 MAFKO60675 156 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 DGKIO75912 1065 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 FUCA1P04066 466 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 FPR2P25090 351 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 GYG1P46976 350 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 JAG1P78504 1218 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 PAK1Q13153 545 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 CCDC152Q4G0S7 254 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 C17orf99Q6UX52 265 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 RPTNQ6XPR3 784 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 CEP68Q76N32 757 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBR1-203ENST00000562173 SEC14L1Q92503 715 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
UBR1-203ENST00000562173 DEFB118Q96PH6 123 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 PUS3Q9BZE2 481 aaKnown RBP6.88□□□□□ -1.31
UBR1-203ENST00000562173 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
UBR1-203ENST00000562173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBR1-203ENST00000562173 FBLN5Q9UBX5 448 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 RIPOR2Q9Y4F9 1068 aa6.88□□□□□ -1.31
UBR1-203ENST00000562173 GBF1Q92538 1859 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 CDK5RAP2Q96SN8 1893 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 MYO5AQ9Y4I1 1855 aaKnown RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 DNAH12Q6ZR08 3092 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 MAST2Q6P0Q8 1798 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 COL1A1P02452 1464 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 MYO9BQ13459 2157 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 MSCO60682 206 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 ASMTLO95671 621 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 GALK1P51570 392 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 GUCY1A3Q02108 690 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 ZC3H14Q6PJT7 736 aaKnown RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 BRAPQ7Z569 592 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 FBXO15Q8NCQ5 510 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 CHAMP1Q96JM3 812 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 GDF15Q99988 308 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 COA1Q9GZY4 146 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 TRIM39Q9HCM9 518 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 DCP1AQ9NPI6 582 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 CWC25Q9NXE8 425 aaPredicted RBP6.87□□□□□ -1.31
UBR1-203ENST00000562173 SRRDQ9UH36 339 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 TRAF6Q9Y4K3 522 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 MYH2Q9UKX2 1941 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 DOCK1Q14185 1865 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 SIPA1L1O43166 1804 aa6.87□□□□□ -1.31
UBR1-203ENST00000562173 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 PI4KAP2A4QPH2 592 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 B4E1Z4 1266 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 GSTA4O15217 222 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 TLR2O60603 784 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 NPTXRO95502 500 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 SOD2P04179 222 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 FZD5Q13467 585 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 FAM47CQ5HY64 1035 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 PI4KAP1Q8N8J0 262 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 USP38Q8NB14 1042 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 BHLHE22Q8NFJ8 381 aaPredicted RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 SLC7A14Q8TBB6 771 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 TSR2Q969E8 191 aaKnown RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 MAGEB10Q96LZ2 347 aaPredicted RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 MAGEC2Q9UBF1 373 aaPredicted RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 DBF4Q9UBU7 674 aaPredicted RBP6.86□□□□□ -1.31
UBR1-203ENST00000562173 NUB1Q9Y5A7 615 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 REV3LO60673 3130 aa6.86□□□□□ -1.31
UBR1-203ENST00000562173 KRIT1O00522 736 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 CRTAMO95727 393 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 NTRK1P04629 796 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 GJB1P08034 283 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 SPIRE1Q08AE8 756 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 CHAF1AQ13111 956 aaPredicted RBP6.85□□□□□ -1.31
UBR1-203ENST00000562173 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBR1-203ENST00000562173 MLANAQ16655 118 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 SHROOM1Q2M3G4 852 aaPredicted RBP6.85□□□□□ -1.31
UBR1-203ENST00000562173 PRR23BQ6ZRT6 265 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 ZNF605Q86T29 641 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 WRNIP1Q96S55 665 aa6.85□□□□□ -1.31
UBR1-203ENST00000562173 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
UBR1-203ENST00000562173 PFASO15067 1338 aa6.84□□□□□ -1.31
UBR1-203ENST00000562173 MUC3AQ02505 3323 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms