RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 GOLGA1Q92805 767 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 CCDC43Q96MW1 224 aaKnown RBP11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 PTPN18Q99952 460 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 HAPLN2Q9GZV7 340 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 KMT5AQ9NQR1 393 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 PDGFCQ9NRA1 345 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 STYXL1Q9Y6J8 313 aa11.1□□□□□ -0.63
TUBGCP4-202ENST00000561691 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TCF7P36402 384 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 VAMP7P51809 220 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 FKBP1BP68106 108 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 PTK2Q05397 1052 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 DRP2Q13474 957 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 RAPGEF1Q13905 1077 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 SLC9C1Q4G0N8 1177 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 PAPD7Q5XG87 772 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 PHLDB3Q6NSJ2 640 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 INTS8Q75QN2 995 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TRAPPC11Q7Z392 1133 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 MICALL1Q8N3F8 863 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 SEPT1Q8WYJ6 367 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 COPS5Q92905 334 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TMEM143Q96AN5 459 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 NAPGQ99747 312 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 IFIH1Q9BYX4 1025 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 CDC23Q9UJX2 597 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 CAPN6Q9Y6Q1 641 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 IGKV6-21A0A0C4DH24 114 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 GOLGA8IPA6NC78 632 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 GOLGA8JA6NMD2 632 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 KIF3CO14782 793 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 PIGRP01833 764 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 CETPP11597 493 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 USP8P40818 1118 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 SMTNP53814 917 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 KCTD2Q14681 263 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 ASIC2Q16515 512 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 SLC18A3Q16572 532 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TAPT1Q6NXT6 567 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 HDXQ7Z353 690 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 KIAA1328Q86T90 577 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 FAM71BQ8TC56 605 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 RAB21Q9UL25 225 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-202ENST00000561691 MCM3APO60318 1980 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 RBM47A0AV96 593 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 CTAGE9A4FU28 777 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 F8VZ95 297 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 P4HA2O15460 535 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 AKR1B10O60218 316 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 MAFO75444 373 aaPredicted RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 MAGEA1P43355 309 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 STAT5BP51692 787 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 GTF2A2P52657 109 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 WNT7BP56706 349 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 MYL7Q01449 175 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 MAP2K1Q02750 393 aaPredicted RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 CCL15Q16663 113 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 BRDTQ58F21 947 aaPredicted RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 CST9Q5W186 159 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 SLC30A5Q8TAD4 765 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 PARD3BQ8TEW8 1205 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 GTF3C2Q8WUA4 911 aaPredicted RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
TUBGCP4-202ENST00000561691 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 KRT86O43790 486 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 ERLIN2O94905 339 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 GARTP22102 1010 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 RFC5P40937 340 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 GCLMP48507 274 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 POLGP54098 1239 aaPredicted RBP11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 ARID5AQ03989 594 aa11.07□□□□□ -0.64
TUBGCP4-202ENST00000561691 ARHGAP1Q07960 439 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms