RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ARSHQ5FYA8 562 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 ATF7IP2Q5U623 682 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 LRRC55Q6ZSA7 311 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 RBM23Q86U06 439 aaKnown RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 ZNF598Q86UK7 904 aaKnown RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 DAW1Q8N136 415 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 SMG8Q8ND04 991 aaKnown RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 DHX58Q96C10 678 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 SPATA32Q96LK8 384 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 RPS6KC1Q96S38 1066 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 GAD1Q99259 594 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
HERC1-212ENST00000561348 BLOC1S4Q9NUP1 217 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 ANKFY1Q9P2R3 1169 aa11.14□□□□□ -0.63
HERC1-212ENST00000561348 K7ENM7 598 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 ACKR2O00590 384 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 SLC26A4O43511 780 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PPP6R2O75170 966 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 OFD1O75665 1012 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 FGF18O76093 207 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 EDN1P05305 212 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 ITGB1P05556 798 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 RB1P06400 928 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 GUCY2CP25092 1073 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 SCNN1GP51170 649 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 AFF1P51825 1210 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 BCAR1P56945 870 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 KRT85P78386 507 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 KRT17Q04695 432 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 MAPK7Q13164 816 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PCBP1Q15365 356 aaKnown RBP eCLIP11.13□□□□□ -0.63
HERC1-212ENST00000561348 AMHR2Q16671 573 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 ZNF568Q3ZCX4 644 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 EEF1DP3Q658K8 133 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 CDCA2Q69YH5 1023 aaPredicted RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 KCNT2Q6UVM3 1135 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 TMEM87AQ8NBN3 555 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 CNNM3Q8NE01 707 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 KCNG4Q8TDN1 519 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 POF1BQ8WVV4 589 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 RABGGTAQ92696 567 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PRIMPOLQ96LW4 560 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 TARS2Q9BW92 718 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 NFKBIZQ9BYH8 718 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 FZD8Q9H461 694 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 CWH43Q9H720 699 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 ENTPD7Q9NQZ7 604 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 SNTG2Q9NY99 539 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 LARSQ9P2J5 1176 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 STK17AQ9UEE5 414 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PUF60Q9UHX1 559 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 PCDHA7Q9UN72 937 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 PRG3Q9Y2Y8 225 aaPredicted RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 ZDHHC9Q9Y397 364 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 RBM19Q9Y4C8 960 aaKnown RBP11.13□□□□□ -0.63
HERC1-212ENST00000561348 ATP6V1DQ9Y5K8 247 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 KIAA1671Q9BY89 1806 aa11.13□□□□□ -0.63
HERC1-212ENST00000561348 CNTNAP2Q9UHC6 1331 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 CDH23Q9H251 3354 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 A0A087X0B3 334 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 A0A1B0GUA9 196 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 ARL5CA6NH57 179 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 ZNF623O75123 536 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 BRD1O95696 1058 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 OR1G1P47890 313 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 GIT2Q14161 759 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 TCEAL5Q5H9L2 206 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 NT5DC1Q5TFE4 455 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 PLPP4Q5VZY2 271 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 TMC7Q7Z402 723 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 HAUS6Q7Z4H7 955 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
HERC1-212ENST00000561348 MRPL10Q7Z7H8 261 aaKnown RBP11.12□□□□□ -0.63
HERC1-212ENST00000561348 ZNF280BQ86YH2 543 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
HERC1-212ENST00000561348 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 NOC3LQ8WTT2 800 aaKnown RBP11.12□□□□□ -0.63
HERC1-212ENST00000561348 DDX12PQ92771 950 aa11.12□□□□□ -0.63
HERC1-212ENST00000561348 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms