RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 AUTS2Q8WXX7 1259 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 GAD1Q99259 594 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 VN1R3Q9BXE9 311 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 TRIM6Q9C030 488 aaPredicted RBP19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZBP1Q9H171 429 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 BHMT2Q9H2M3 363 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 DDX19AQ9NUU7 478 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 KIAA1024Q9UPX6 916 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 SMC3Q9UQE7 1217 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 USP15Q9Y4E8 981 aaPredicted RBP19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 TECTAO75443 2155 aa19.05■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 C2orf71A6NGG8 1288 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 NPTXRO95502 500 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 ANK1P16157 1881 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 CYP11B2P19099 503 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 MUTP22033 750 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 KCNC3Q14003 757 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZBTB8OSQ8IWT0 167 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 VPS52Q8N1B4 723 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZFP42Q96MM3 310 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 FAM193BQ96PV7 902 aaPredicted RBP19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 C1QTNF1Q9BXJ1 281 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 RAB34Q9BZG1 259 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 POLD4Q9HCU8 107 aa19.04■□□□□ 0.64
CDC42BPB-208ENST00000561271 ARL5CA6NH57 179 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 C19orf67A6NJJ6 358 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 TTLL13PA6NNM8 815 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 LAD1O00515 517 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 SRGAP2BP0DMP2 458 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 CDC25AP30304 524 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 PRPHP41219 470 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 SCNN1GP51170 649 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 RILPL1Q5EBL4 403 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 SLC27A1Q6PCB7 646 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 DDX53Q86TM3 631 aaKnown RBP19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 MRPL43Q8N983 215 aaKnown RBP19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 KIFC3Q9BVG8 833 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 APOL5Q9BWW9 433 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 PRMT7Q9NVM4 692 aaPredicted RBP19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 ZNF318Q5VUA4 2279 aa19.03■□□□□ 0.64
CDC42BPB-208ENST00000561271 DOCK8Q8NF50 2099 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 CARNS1A5YM72 827 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 FAM86C2PA6NEL3 165 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 E9PMD0 336 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 EDN1P05305 212 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 LIG1P18858 919 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 ATP2C1P98194 919 aaPredicted RBP19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 PDIA5Q14554 519 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 ANKRD54Q6NXT1 300 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 PRIMPOLQ96LW4 560 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 POP1Q99575 1024 aaKnown RBP19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 TMEM175Q9BSA9 504 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 CCDC113Q9H0I3 377 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 C2orf40Q9H1Z8 148 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 UBN1Q9NPG3 1134 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 C11orf16Q9NQ32 467 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 KANSL3Q9P2N6 904 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 RAPGEFL1Q9UHV5 662 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 USP20Q9Y2K6 914 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 PRG3Q9Y2Y8 225 aaPredicted RBP19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 HCFC2Q9Y5Z7 792 aa19.02■□□□□ 0.64
CDC42BPB-208ENST00000561271 A0A1B0GUA9 196 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 INPPL1O15357 1258 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 CLASP2O75122 1294 aaKnown RBP19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 CXCL14O95715 111 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 PRKCBP05771 671 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 CTSAP10619 480 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 AKAP5P24588 427 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 NAMPTP43490 491 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 TMEM132AQ24JP5 1023 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 KRT79Q5XKE5 535 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 TMEM184AQ6ZMB5 413 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 DTHD1Q6ZMT9 781 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 HACE1Q8IYU2 909 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 DEPTORQ8TB45 409 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 MMTAG2Q9BU76 263 aaKnown RBP19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 FZD8Q9H461 694 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 PDZD7Q9H5P4 517 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 MARCH5Q9NX47 278 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 MIOSQ9NXC5 875 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 KLK14Q9P0G3 267 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 CDH22Q9UJ99 828 aa19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.01■□□□□ 0.63
CDC42BPB-208ENST00000561271 PI4K2BG5E9Z4 385 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 NRP1O14786 923 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 SSBP05455 408 aaKnown RBP eCLIP19■□□□□ 0.63
CDC42BPB-208ENST00000561271 COL9A1P20849 921 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 DSC1Q08554 894 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 PRPF4BQ13523 1007 aaKnown RBP19■□□□□ 0.63
CDC42BPB-208ENST00000561271 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
CDC42BPB-208ENST00000561271 PPP2R5AQ15172 486 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 PTPN14Q15678 1187 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 ZRSR1Q15695 479 aaKnown RBP19■□□□□ 0.63
CDC42BPB-208ENST00000561271 MAPK6Q16659 721 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 FAM187BQ17R55 369 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 SYCE2Q6PIF2 218 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 KCNK18Q7Z418 384 aa19■□□□□ 0.63
CDC42BPB-208ENST00000561271 COLGALT2Q8IYK4 626 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms