RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 TIMP1P01033 207 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 CXCL10P02778 98 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 COL9A1P20849 921 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 FGFR4P22455 802 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 EIF4BP23588 611 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 HOXD13P35453 343 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 CCL23P55773 120 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 GTF2BQ00403 316 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 STK4Q13043 487 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 MORC3Q14149 939 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 FAM187BQ17R55 369 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 BMT2Q1RMZ1 405 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 TCTN1Q2MV58 587 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZC2HC1CQ53FD0 456 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 TSHZ1Q6ZSZ6 1077 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZNF720Q7Z2F6 126 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 HAUS6Q7Z4H7 955 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 SRGAP1Q7Z6B7 1085 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 MAP4K3Q8IVH8 894 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZBTB8OSQ8IWT0 167 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 SMYD4Q8IYR2 804 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 TET1Q8NFU7 2136 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 HVCN1Q96D96 273 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 SCLT1Q96NL6 688 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 IKZF4Q9H2S9 585 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 FZD8Q9H461 694 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 TMEM134Q9H6X4 195 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 MRPL44Q9H9J2 332 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 ERVK-5Q9HDB9 667 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 SLC39A2Q9NP94 309 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 GINS2Q9Y248 185 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 NOC2LQ9Y3T9 749 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 ANK1P16157 1881 aa7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 PDCD11Q14690 1871 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-210ENST00000560834 INO80B-WBP1J3KQ70 363 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 BIN1O00499 593 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 ABLIM1O14639 778 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PIGRP01833 764 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PRKCBP05771 671 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SYN1P17600 705 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SFPQP23246 707 aaKnown RBP eCLIP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 CD52P31358 61 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 RGS19P49795 217 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 CDC42EP1Q00587 391 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 KCNA1Q09470 495 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PSMD2Q13200 908 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 ALCAMQ13740 583 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PLEKHG4Q58EX7 1191 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZNF658Q5TYW1 1059 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 MFSD5Q6N075 450 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SLC39A4Q6P5W5 647 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 TRIML1Q8N9V2 468 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SLC17A8Q8NDX2 589 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SCFD1Q8WVM8 642 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SYAP1Q96A49 352 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PRIMPOLQ96LW4 560 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 FUCA2Q9BTY2 467 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 GCOM2Q9BZD3 368 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 INO80BQ9C086 356 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 TMX1Q9H3N1 280 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 AGPAT5Q9NUQ2 364 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 PRMT7Q9NVM4 692 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 RMND1Q9NWS8 449 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 TBX20Q9UMR3 447 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 USP20Q9Y2K6 914 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 SQORQ9Y6N5 450 aa7.73□□□□□ -1.17
CTDSPL2-210ENST00000560834 RCCD1A6NED2 376 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 TISP43B9A030 160 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 H0YCG3 227 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 MGEA5O60502 916 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 RPS6KA5O75582 802 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ERLIN2O94905 339 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 PRPF6O94906 941 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 PARNO95453 639 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 CSF2RAP15509 400 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 RAG1P15918 1043 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ARF4P18085 180 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 SCP2P22307 547 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 PROZP22891 400 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 HOXA11P31270 313 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 RFC2P35250 354 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 EFNA5P52803 228 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 SMTNP53814 917 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 PAK2Q13177 524 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 DSC3Q14574 896 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 PCBP1Q15365 356 aaKnown RBP eCLIP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 MAPK6Q16659 721 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 DPCR1Q3MIW9 517 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZSCAN23Q3MJ62 389 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZCWPW2Q504Y3 356 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ISM2Q6H9L7 571 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 CATSPER4Q7RTX7 472 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 GUF1Q8N442 669 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 USP38Q8NB14 1042 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 ZNF507Q8TCN5 953 aa7.72□□□□□ -1.17
CTDSPL2-210ENST00000560834 CCDC47Q96A33 483 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms