RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
KNSTRN-211ENST00000560673 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 ZBTB42B2RXF5 422 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 BACH1O14867 736 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 B4GALT3O60512 393 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 OFD1O75665 1012 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 FAM160B1Q5W0V3 765 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 TCEAL6Q6IPX3 200 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 ITFG1Q8TB96 612 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 URGCPQ8TCY9 931 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 TCEAL3Q969E4 200 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 MKNK1Q9BUB5 465 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 JADE2Q9NQC1 790 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 CHST12Q9NRB3 414 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 KLK13Q9UKR3 277 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 DOCK6Q96HP0 2047 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 ACACAQ13085 2346 aa12.89□□□□□ -0.35
KNSTRN-211ENST00000560673 MTCL1Q9Y4B5 1905 aaKnown RBP12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 PIK3CDO00329 1044 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 NRP1O14786 923 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 DDHD2O94830 711 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 FGFR4P22455 802 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 CLCN3P51790 818 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 DSG1Q02413 1049 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 GAS6Q14393 721 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 KBTBD6Q86V97 674 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 TRAIPQ9BWF2 469 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 BRD9Q9H8M2 597 aa12.88□□□□□ -0.35
KNSTRN-211ENST00000560673 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 MEIS2O14770 477 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 XYLBO75191 536 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 RPP40O75818 363 aaKnown RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 ATG7O95352 703 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 HNRNPA1P09651 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 CHRNB1P11230 501 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 DARSP14868 501 aaKnown RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 TMOD1P28289 359 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 HOXA6P31267 233 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 IFIT1BQ5T764 474 aaKnown RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 ZNF668Q96K58 619 aaPredicted RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 POLIQ9UNA4 740 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 NFASCO94856 1347 aa12.87□□□□□ -0.35
KNSTRN-211ENST00000560673 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 IGKV6D-21A0A0A0MT36 114 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 CAPNS1P04632 268 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 FGD1P98174 961 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 PTGDRQ13258 359 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 LRRC32Q14392 662 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 LIN9Q5TKA1 542 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 CKAP2LQ8IYA6 745 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 KCNH7Q9NS40 1196 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 FNIP2Q9P278 1114 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 KCNH3Q9ULD8 1083 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 TTC41PQ6P2S7 1318 aa12.86□□□□□ -0.35
KNSTRN-211ENST00000560673 CCL16O15467 120 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 MAGEB2O15479 319 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 PLA2G2AP14555 144 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 RAB27AP51159 221 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 CREMQ03060 361 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 RNF168Q8IYW5 571 aaPredicted RBP12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 ING5Q8WYH8 240 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 IRF7Q92985 503 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 UBAC1Q9BSL1 405 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 FAM105AQ9NUU6 356 aa12.85□□□□□ -0.35
KNSTRN-211ENST00000560673 MARCH5Q9NX47 278 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms