RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 KIFAP3Q92845 792 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 ZFP42Q96MM3 310 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 GAD1Q99259 594 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PDZD7Q9H5P4 517 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 PRMT7Q9NVM4 692 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 MIOSQ9NXC5 875 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 MYH11P35749 1972 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
RABGGTA-216ENST00000560243 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 HIDE1A8MVS5 230 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 STX6O43752 255 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 GALTP07902 379 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 AKAP5P24588 427 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 PPM1AP35813 382 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 MLH1P40692 756 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 NPTX2P47972 431 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 ALDH7A1P49419 539 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 SLC12A3P55017 1021 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 ADAM15Q13444 863 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 PRPF4BQ13523 1007 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 PPP2R5AQ15172 486 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 CLUL1Q15846 466 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 MAPK6Q16659 721 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 FAM187BQ17R55 369 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 SPECC1Q5M775 1068 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 NT5DC1Q5TFE4 455 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 URGCPQ8TCY9 931 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 IFT74Q96LB3 600 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 AK8Q96MA6 479 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 VN1R3Q9BXE9 311 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 TLE6Q9H808 572 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 LZTS1Q9Y250 596 aa12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 TDRD15B5MCY1 1934 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-216ENST00000560243 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 ACKR2O00590 384 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 GLP2RO95838 553 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 BMP15O95972 392 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 PLA2G4BP0C869 781 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 IL9P15248 144 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 UBA7P41226 1012 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 SCNN1GP51170 649 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 KRT17Q04695 432 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 ARSHQ5FYA8 562 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 PTCRAQ6ISU1 281 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 TAS1R3Q7RTX0 852 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 HSCBQ8IWL3 235 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 EFHBQ8N7U6 833 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 AUTS2Q8WXX7 1259 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 IGSF21Q96ID5 467 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 CLIC6Q96NY7 704 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 ENTPD7Q9NQZ7 604 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-216ENST00000560243 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 F8W810 466 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 INPPL1O15357 1258 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 SLC16A4O15374 487 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 NCK2O43639 380 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 PLCG1P19174 1290 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 EFNA5P52803 228 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 DHX8Q14562 1220 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 DUSP6Q16828 381 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 TMC7Q7Z402 723 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 TMEM169Q96HH4 297 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
RABGGTA-216ENST00000560243 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms