RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 PLCB3Q01970 1234 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 GRIN1Q05586 938 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 XKR9Q5GH70 373 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 KCNT2Q6UVM3 1135 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 THNSL1Q8IYQ7 743 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 HELQQ8TDG4 1101 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 MSLNLQ96KJ4 702 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 EPHX3Q9H6B9 360 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 TLR9Q9NR96 1032 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 AGPAT5Q9NUQ2 364 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CLEC1BQ9P126 229 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 KCNH3Q9ULD8 1083 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 ZKSCAN5Q9Y2L8 839 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 FSCN2O14926 492 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
IDH3A-217ENST00000559889 ZNF623O75123 536 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CAVIN2O95810 425 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 SPATA31C1P0DKV0 1188 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 MCM7P33993 719 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 NRIP1P48552 1158 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CATSPER4Q7RTX7 472 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CEP57L1Q8IYX8 460 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 EFHBQ8N7U6 833 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 PDILTQ8N807 584 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 LPPQ93052 612 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 FAM105AQ9NUU6 356 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 LZTS1Q9Y250 596 aa10.08□□□□□ -0.8
IDH3A-217ENST00000559889 RARRES1P49788 294 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 RBM10P98175 930 aaKnown RBP10.07□□□□□ -0.8
IDH3A-217ENST00000559889 ZNF174Q15697 407 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 CLUL1Q15846 466 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 RESP18Q5W5W9 173 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 SRGAP1Q7Z6B7 1085 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 GJD3Q8N144 294 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 RNF149Q8NC42 400 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
IDH3A-217ENST00000559889 ANKEF1Q9NU02 776 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 FAM13BQ9NYF5 915 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 PER2O15055 1255 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 MBTPS2O43462 519 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 ZP2Q05996 745 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
IDH3A-217ENST00000559889 DPCR1Q3MIW9 517 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 UBXN11Q5T124 520 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 VN1R2Q8NFZ6 395 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 PIGOQ8TEQ8 1089 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 TCP11Q8WWU5 503 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 ZNF558Q96NG5 402 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 MTRQ99707 1265 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
IDH3A-217ENST00000559889 HPSEQ9Y251 543 aa10.07□□□□□ -0.8
IDH3A-217ENST00000559889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
IDH3A-217ENST00000559889 POLR2DO15514 142 aaKnown RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 ASAP2O43150 1006 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 EYA4O95677 639 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 ARL2P36404 184 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 AFF1P51825 1210 aaKnown RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PNOCQ13519 176 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 KCNC3Q14003 757 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 IQCB1Q15051 598 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 AGMOQ6ZNB7 445 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 TMEM173Q86WV6 379 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 CATSPER3Q86XQ3 398 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 SLC39A11Q8N1S5 342 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 AOPEPQ8N6M6 819 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 C4orf32Q8N8J7 132 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 ASAP3Q8TDY4 903 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 MICAL1Q8TDZ2 1067 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 TLE6Q9H808 572 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 FBXO2Q9UK22 296 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PCDHB2Q9Y5E7 798 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 ARID2Q68CP9 1835 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 HIDE1A8MVS5 230 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 B4GALT3O60512 393 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 MED24O75448 989 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 OFD1O75665 1012 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 DGAT1O75907 488 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 SKIP12755 728 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PPM1AP35813 382 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 TECP42680 631 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 NDUFV1P49821 464 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 RAB27AP51159 221 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 BCAR1P56945 870 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PTENP60484 403 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 CAPSQ13938 189 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 MXD4Q14582 209 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 DUSP6Q16828 381 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
IDH3A-217ENST00000559889 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
IDH3A-217ENST00000559889 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms