RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 SCLT1Q96NL6 688 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 ADAM2Q99965 735 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 TRAIPQ9BWF2 469 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.82
HMG20A-209ENST00000559728 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 HAPLN2Q9GZV7 340 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 PDZD7Q9H5P4 517 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 RNF19AQ9NV58 838 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 PRMT7Q9NVM4 692 aaPredicted RBP9.96□□□□□ -0.82
HMG20A-209ENST00000559728 TBC1D7Q9P0N9 293 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 SEL1LQ9UBV2 794 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 PCDHA5Q9Y5H7 936 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 PHLPP2Q6ZVD8 1323 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 CNTNAP2Q9UHC6 1331 aa9.96□□□□□ -0.82
HMG20A-209ENST00000559728 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.82
HMG20A-209ENST00000559728 SCN5AQ14524 2016 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 PDE4DIPQ5VU43 2346 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 K7ENM7 598 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 MEFVO15553 781 aaPredicted RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 BAIAP3O94812 1187 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 RHOBTB3O94955 611 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 PIGRP01833 764 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 PRKCBP05771 671 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 KRT18P05783 430 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 BMP6P22004 513 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 SFPQP23246 707 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 EFNA5P52803 228 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 IKBKEQ14164 716 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 PCBP1Q15365 356 aaKnown RBP eCLIP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 CATSPER4Q7RTX7 472 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 FAM178BQ8IXR5 827 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 CCDC65Q8IXS2 484 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 SMG8Q8ND04 991 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 MARVELD3Q96A59 401 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 PRIMPOLQ96LW4 560 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 TARS2Q9BW92 718 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 EIF2AQ9BY44 585 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
HMG20A-209ENST00000559728 CHST12Q9NRB3 414 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 TBX20Q9UMR3 447 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 ZMYM2Q9UBW7 1377 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 COL4A6Q14031 1691 aa9.95□□□□□ -0.82
HMG20A-209ENST00000559728 A0A0U1RQF3 1178 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 TISP43B9A030 160 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 K7ERI5 159 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 FAM189A1O60320 539 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 ADSSP30520 456 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 AXLP30530 894 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 KCNB1Q14721 858 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 MAPK6Q16659 721 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 FAM26FQ5R3K3 315 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 KANK3Q6NY19 840 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
HMG20A-209ENST00000559728 SLC24A5Q71RS6 500 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 ECHDC2Q86YB7 292 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 ZBTB8OSQ8IWT0 167 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 TDHQ8IZJ6 230 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 ZNF507Q8TCN5 953 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 SCFD1Q8WVM8 642 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 TOP1MTQ969P6 601 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 ZBTB45Q96K62 511 aaPredicted RBP9.94□□□□□ -0.82
HMG20A-209ENST00000559728 FTHL17Q9BXU8 183 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 CXCL16Q9H2A7 254 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 CLSTN2Q9H4D0 955 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 SLC39A2Q9NP94 309 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 PIN4Q9Y237 131 aaKnown RBP9.94□□□□□ -0.82
HMG20A-209ENST00000559728 TNFSF13BQ9Y275 285 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 GDAQ9Y2T3 454 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 EVPLQ92817 2033 aa9.94□□□□□ -0.82
HMG20A-209ENST00000559728 GRXCR1A8MXD5 290 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 ANKRD63C9JTQ0 380 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 TGFB1I1O43294 461 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 ZNF623O75123 536 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 PRPF6O94906 941 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 LINC00271P0C7V0 271 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 AFF1P51825 1210 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 SMTNP53814 917 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 HTRA4P83105 476 aaPredicted RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 PRPF4BQ13523 1007 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 BMT2Q1RMZ1 405 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 L1TD1Q5T7N2 865 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 MRPL10Q7Z7H8 261 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 CEP120Q8N960 986 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 ZNF689Q96CS4 500 aaPredicted RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 HVCN1Q96D96 273 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 RNPC3Q96LT9 517 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 CDT1Q9H211 546 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 MRPL44Q9H9J2 332 aaKnown RBP9.93□□□□□ -0.82
HMG20A-209ENST00000559728 FAM105AQ9NUU6 356 aa9.93□□□□□ -0.82
HMG20A-209ENST00000559728 KCNG1Q9UIX4 513 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms