RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ERVFC1P60507 584 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 CLUL1Q15846 466 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 MAPK6Q16659 721 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 CTC1Q2NKJ3 1217 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 SLC27A1Q6PCB7 646 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 KCNK18Q7Z418 384 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 CDR2LQ86X02 465 aaPredicted RBP13.91□□□□□ -0.18
LRRC28-214ENST00000559433 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 PLIN2Q99541 437 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 TCF25Q9BQ70 676 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NT5C3AQ9H0P0 336 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NXF3Q9H4D5 531 aaKnown RBP13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 NGRNQ9NPE2 291 aaKnown RBP13.91□□□□□ -0.18
LRRC28-214ENST00000559433 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 HES2Q9Y543 173 aa13.91□□□□□ -0.18
LRRC28-214ENST00000559433 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 PER2O15055 1255 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 TBX10O75333 385 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 POMCP01189 267 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
LRRC28-214ENST00000559433 PRKCBP05771 671 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 SYT1P21579 422 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 LTBRP36941 435 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
LRRC28-214ENST00000559433 ADAM15Q13444 863 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 PRPF4BQ13523 1007 aaKnown RBP13.9□□□□□ -0.18
LRRC28-214ENST00000559433 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
LRRC28-214ENST00000559433 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 HYIQ5T013 277 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 CABP7Q86V35 215 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 EFHBQ8N7U6 833 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 PNMA5Q96PV4 448 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 CDCA3Q99618 268 aaPredicted RBP13.9□□□□□ -0.18
LRRC28-214ENST00000559433 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 RUSC1Q9BVN2 902 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 FZD8Q9H461 694 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 DNAJB4Q9UDY4 337 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
LRRC28-214ENST00000559433 A0A1B0GUA9 196 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 CCDC169A6NNP5 214 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 N4BP3O15049 544 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 B4GALT3O60512 393 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 HIP1RO75146 1068 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 ALDH2P05091 517 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 GALTP07902 379 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 IL9P15248 144 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 MLH1P40692 756 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 SLC11A1P49279 550 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 EFNA5P52803 228 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 DLX2Q07687 328 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-214ENST00000559433 RESTQ13127 1097 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 RINT1Q6NUQ1 792 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-214ENST00000559433 GJD3Q8N144 294 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 AK8Q96MA6 479 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 GAD1Q99259 594 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 CCDC113Q9H0I3 377 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
LRRC28-214ENST00000559433 TTLL13PA6NNM8 815 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 HIDE1A8MVS5 230 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 ACKR2O00590 384 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 NR1I2O75469 434 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 DDHD2O94830 711 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 CXCL14O95715 111 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 AKAP5P24588 427 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 LONP1P36776 959 aaKnown RBP13.88□□□□□ -0.19
LRRC28-214ENST00000559433 UBA7P41226 1012 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 SCNN1GP51170 649 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 PEX3P56589 373 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 DMP1Q13316 513 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-214ENST00000559433 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
LRRC28-214ENST00000559433 DUSP6Q16828 381 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 TMEM119Q4V9L6 283 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 C1orf186Q6ZWK4 172 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 FAM178BQ8IXR5 827 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 KCTD17Q8N5Z5 321 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 RASSF8Q8NHQ8 419 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
LRRC28-214ENST00000559433 SNX21Q969T3 373 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 ADPGKQ9BRR6 497 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 TMEM175Q9BSA9 504 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 TIPINQ9BVW5 301 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 C1QTNF1Q9BXJ1 281 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 PARP2Q9UGN5 583 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 CLIC4Q9Y696 253 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 PHLPP2Q6ZVD8 1323 aa13.88□□□□□ -0.19
LRRC28-214ENST00000559433 INPPL1O15357 1258 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 SLC26A4O43511 780 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms