RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PRIMPOLQ96LW4 560 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 CASD1Q96PB1 797 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 RAD9AQ99638 391 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 NXF3Q9H4D5 531 aaKnown RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 IPPQ9Y573 584 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 PCDHB2Q9Y5E7 798 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 MRPL42Q9Y6G3 142 aaKnown RBP12.6□□□□□ -0.39
SNX1-204ENST00000559061 TRANK1O15050 2925 aa12.6□□□□□ -0.39
SNX1-204ENST00000559061 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 TRAK2O60296 914 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 FAM189A1O60320 539 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 ERLIN2O94905 339 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 MYBP10242 640 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
SNX1-204ENST00000559061 AXLP30530 894 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 SYKP43405 635 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 AFMP43652 599 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 EFNA5P52803 228 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 GTF2BQ00403 316 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 PRPF4BQ13523 1007 aaKnown RBP12.59□□□□□ -0.39
SNX1-204ENST00000559061 RAB30Q15771 203 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 MAPK6Q16659 721 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 FAM43BQ6ZT52 329 aaPredicted RBP12.59□□□□□ -0.39
SNX1-204ENST00000559061 HAUS6Q7Z4H7 955 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 TMEM192Q8IY95 271 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 CEP120Q8N960 986 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 GSTCDQ8NEC7 633 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 ZBTB45Q96K62 511 aaPredicted RBP12.59□□□□□ -0.39
SNX1-204ENST00000559061 GUCD1Q96NT3 240 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 TARS2Q9BW92 718 aaKnown RBP12.59□□□□□ -0.39
SNX1-204ENST00000559061 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 MAGEF1Q9HAY2 307 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
SNX1-204ENST00000559061 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.39
SNX1-204ENST00000559061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 K7ENM7 598 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 K7ERI5 159 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 INPPL1O15357 1258 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 TBCAO75347 108 aaKnown RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 NR1I2O75469 434 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 ZNF202O95125 648 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 NPTXRO95502 500 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 PIGRP01833 764 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 KRT18P05783 430 aaKnown RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 ZSCAN20P17040 1043 aaPredicted RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 PAN2Q504Q3 1202 aaKnown RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 CMTR2Q8IYT2 770 aaKnown RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 CCDC51Q96ER9 411 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 C17orf80Q9BSJ5 609 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 CDT1Q9H211 546 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 SEMA6BQ9H3T3 888 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 ZHX3Q9H4I2 956 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 CWH43Q9H720 699 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 PANK4Q9NVE7 773 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.4
SNX1-204ENST00000559061 TBX20Q9UMR3 447 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 TNFSF13BQ9Y275 285 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 INSL6Q9Y581 213 aa12.58□□□□□ -0.4
SNX1-204ENST00000559061 ANKRD63C9JTQ0 380 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 LPXNO60711 386 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 OFD1O75665 1012 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 EOMESO95936 686 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 IDEP14735 1019 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 ASIC1P78348 528 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 DPYDQ12882 1025 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 ZBTB41Q5SVQ8 909 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 ATF7IP2Q5U623 682 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 UNC13DQ70J99 1090 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 ZSWIM2Q8NEG5 633 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 CLP1Q92989 425 aaKnown RBP12.57□□□□□ -0.4
SNX1-204ENST00000559061 FAM161BQ96MY7 647 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 YME1L1Q96TA2 773 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 ZNF576Q9H609 170 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 CERS4Q9HA82 394 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 PLAGL2Q9UPG8 496 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 PCDHB7Q9Y5E2 793 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 CITO14578 2027 aa12.57□□□□□ -0.4
SNX1-204ENST00000559061 TMEM265A0A087WTH1 108 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 TBKBP1A7MCY6 615 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 RFXAPO00287 272 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 N4BP3O15049 544 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
SNX1-204ENST00000559061 STAG3L1P0CL83 205 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms