RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MYO7AQ13402 2215 aa15.24■□□□□ 0.03
TSPAN3-205ENST00000558745 NLRC5Q86WI3 1866 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 B4GALT3O60512 393 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 ITGB1P05556 798 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 SKIP12755 728 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 ITGA4P13612 1032 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 DNAJB1P25685 340 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 STAT6P42226 847 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 RAB27AP51159 221 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 ATL3Q6DD88 541 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 KCNG4Q8TDN1 519 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 LEO1Q8WVC0 666 aaPredicted RBP15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 PGBD4Q96DM1 585 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 PRIMPOLQ96LW4 560 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 KLK14Q9P0G3 267 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 ARHGAP28Q9P2N2 729 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
TSPAN3-205ENST00000558745 C5orf67F2Z3F1 127 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 HOXA2O43364 376 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 FAM13AO94988 1023 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 POMCP01189 267 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 NMT1P30419 496 aaKnown RBP15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 E2F4Q16254 413 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 NOMO2Q5JPE7 1267 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 SLC27A1Q6PCB7 646 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 COLGALT1Q8NBJ5 622 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 TMEM161BQ8NDZ6 487 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 SPPL3Q8TCT6 385 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 DDX12PQ92771 950 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 DHX58Q96C10 678 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 ZBTB45Q96K62 511 aaPredicted RBP15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 ZFP42Q96MM3 310 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 GAD1Q99259 594 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 NTPCRQ9BSD7 190 aaKnown RBP15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 TMEM134Q9H6X4 195 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 RSAD1Q9HA92 442 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 SNTG2Q9NY99 539 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 KCND2Q9NZV8 630 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 STK17AQ9UEE5 414 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 PARP2Q9UGN5 583 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 CNTNAP2Q9UHC6 1331 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
TSPAN3-205ENST00000558745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 GTPBP6O43824 516 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 DDHD2O94830 711 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 RB1P06400 928 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 MAPTP10636 758 aaKnown RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 POU3F3P20264 500 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 MYH11P35749 1972 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 EFNA5P52803 228 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 KRT85P78386 507 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 CAMK1Q14012 370 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 RESP18Q5W5W9 173 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 GLB1LQ6UWU2 654 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 HAUS6Q7Z4H7 955 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 ZBTB33Q86T24 672 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 SPIRE2Q8WWL2 714 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 CCDC51Q96ER9 411 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 FIZ1Q96SL8 496 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 ACO2Q99798 780 aaKnown RBP15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 NRDE2Q9H7Z3 1164 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 C17orf75Q9HAS0 396 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 TBC1D7Q9P0N9 293 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 ODF2LQ9ULJ1 636 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
TSPAN3-205ENST00000558745 A0A1B0GVL5 298 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 N4BP3O15049 544 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 POLR2DO15514 142 aaKnown RBP15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 TRAK2O60296 914 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 CASP1P29466 404 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 IRS1P35568 1242 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 MLH1P40692 756 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 ZNF131P52739 623 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 SMTNP53814 917 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 NCKAP1LP55160 1127 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 ZC2HC1CQ53FD0 456 aaPredicted RBP15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 KCNT2Q6UVM3 1135 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 LRRC43Q8N309 656 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 CEP120Q8N960 986 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 CNNM3Q8NE01 707 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 POF1BQ8WVV4 589 aa15.2■□□□□ 0.02
TSPAN3-205ENST00000558745 IKZF4Q9H2S9 585 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms