RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ERVFC1P60507 584 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 SPIRE1Q08AE8 756 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 SMC1AQ14683 1233 aaKnown RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 BMS1Q14692 1282 aaKnown RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 CALCRLQ16602 461 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 ME3Q16798 604 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 XKR9Q5GH70 373 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 TMC7Q7Z402 723 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 SRGAP1Q7Z6B7 1085 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 LAPTM4BQ86VI4 370 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 DIS3L2Q8IYB7 885 aaKnown RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 NECAB1Q8N987 351 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 NSUN7Q8NE18 718 aaKnown RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 HAS1Q92839 578 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 TNFRSF25Q93038 417 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 TMEM169Q96HH4 297 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 DHX33Q9H6R0 707 aaKnown RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 AGPAT5Q9NUQ2 364 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 FAM105AQ9NUU6 356 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 CLEC1BQ9P126 229 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 WRAP73Q9P2S5 460 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 RAPGEFL1Q9UHV5 662 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 USP15Q9Y4E8 981 aaPredicted RBP8.99□□□□□ -0.97
TRAF3-205ENST00000558700 CNTNAP2Q9UHC6 1331 aa8.99□□□□□ -0.97
TRAF3-205ENST00000558700 PER2O15055 1255 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 NEMFO60524 1076 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 ERLIN2O94905 339 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 FDPSP14324 419 aaKnown RBP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 CA8P35219 290 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 BCAR1P56945 870 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 CYP4A11Q02928 519 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 RNASELQ05823 741 aaKnown RBP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 NR1H3Q13133 447 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 TFDP1Q14186 410 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 PCBP1Q15365 356 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 SAFBQ15424 915 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 NOMO2Q5JPE7 1267 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 EARS2Q5JPH6 523 aaKnown RBP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 KSR1Q8IVT5 923 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 SLC39A11Q8N1S5 342 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 URGCPQ8TCY9 931 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 PGBD4Q96DM1 585 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 DYDC2Q96IM9 177 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 MTRQ99707 1265 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 PHF7Q9BWX1 381 aaPredicted RBP8.98□□□□□ -0.97
TRAF3-205ENST00000558700 IFT122Q9HBG6 1241 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 RGL1Q9NZL6 768 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 STK39Q9UEW8 545 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 INPP5FQ9Y2H2 1132 aa8.98□□□□□ -0.97
TRAF3-205ENST00000558700 TDRD15B5MCY1 1934 aaKnown RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 ASAP2O43150 1006 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 JAK2O60674 1132 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 DTNBO60941 627 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 ZNF623O75123 536 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 LYPLA2O95372 231 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 HOXB8P17481 243 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 TECP42680 631 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 LAMTOR4Q0VGL1 99 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 CTTNQ14247 550 aaKnown RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 MXD4Q14582 209 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 HERC4Q5GLZ8 1057 aaPredicted RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 ANKRD54Q6NXT1 300 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 LLGL2Q6P1M3 1020 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 TMEM184AQ6ZMB5 413 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 FERMT3Q86UX7 667 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 RNF149Q8NC42 400 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 VN1R2Q8NFZ6 395 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 PRPF31Q8WWY3 499 aaKnown RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 SUSD6Q92537 303 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 CASP10Q92851 521 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 LPPQ93052 612 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 TMEM143Q96AN5 459 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 CCDC51Q96ER9 411 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 EIF2AK1Q9BQI3 630 aaKnown RBP8.97□□□□□ -0.97
TRAF3-205ENST00000558700 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 RSAD1Q9HA92 442 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 ANKEF1Q9NU02 776 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 TBC1D13Q9NVG8 400 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 MUTYHQ9UIF7 546 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 PCDHA12Q9UN75 941 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 PCDHB2Q9Y5E7 798 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 DENND4AQ7Z401 1863 aa8.97□□□□□ -0.97
TRAF3-205ENST00000558700 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 HIDE1A8MVS5 230 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 BTBD18B2RXH4 712 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 LOC730098B7Z3J9 87 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 DGAT1O75907 488 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 SRGAP2CP0DJJ0 459 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 AXLP30530 894 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 HMGN5P82970 282 aaKnown RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 RBM10P98175 930 aaKnown RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 NCBP1Q09161 790 aaKnown RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 ORC2Q13416 577 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 GIT2Q14161 759 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 CBX2Q14781 532 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 LONRF3Q496Y0 759 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms