RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 CUL4AQ13619 759 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 KCNC3Q14003 757 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 TMEM184AQ6ZMB5 413 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 DDX53Q86TM3 631 aaKnown RBP17.15■□□□□ 0.34
CSHL1-208ENST00000558609 TMEM173Q86WV6 379 aaPredicted RBP17.15■□□□□ 0.34
CSHL1-208ENST00000558609 GJD3Q8N144 294 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 SMRP1Q8NCR6 262 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 VN1R2Q8NFZ6 395 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 BSNDQ8WZ55 320 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 PRMT7Q9NVM4 692 aaPredicted RBP17.15■□□□□ 0.34
CSHL1-208ENST00000558609 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
CSHL1-208ENST00000558609 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 B4GALT3O60512 393 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 DDHD2O94830 711 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 NAMPTP43490 491 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 SLC11A1P49279 550 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
CSHL1-208ENST00000558609 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
CSHL1-208ENST00000558609 PPP2R5AQ15172 486 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 SLC27A1Q6PCB7 646 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 ZBTB8OSQ8IWT0 167 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 HACE1Q8IYU2 909 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 VPS52Q8N1B4 723 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 KIFAP3Q92845 792 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 TMEM175Q9BSA9 504 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 MMTAG2Q9BU76 263 aaKnown RBP17.14■□□□□ 0.33
CSHL1-208ENST00000558609 TRIM6Q9C030 488 aaPredicted RBP17.14■□□□□ 0.33
CSHL1-208ENST00000558609 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
CSHL1-208ENST00000558609 HES2Q9Y543 173 aa17.14■□□□□ 0.33
CSHL1-208ENST00000558609 PIEZO1Q92508 2521 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ARL5CA6NH57 179 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 POMCP01189 267 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ALDH2P05091 517 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 CDC25AP30304 524 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ZP2Q05996 745 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 MAPK6Q16659 721 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ARL6IP4Q66PJ3 421 aaKnown RBP17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 BCL7CQ8WUZ0 217 aaPredicted RBP17.13■□□□□ 0.33
CSHL1-208ENST00000558609 FAM193BQ96PV7 902 aaPredicted RBP17.13■□□□□ 0.33
CSHL1-208ENST00000558609 GAD1Q99259 594 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 ZBP1Q9H171 429 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 STK39Q9UEW8 545 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 GIT1Q9Y2X7 761 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 IRAK3Q9Y616 596 aa17.13■□□□□ 0.33
CSHL1-208ENST00000558609 E9PMD0 336 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 ACKR2O00590 384 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 NPTXRO95502 500 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 CXCL14O95715 111 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
CSHL1-208ENST00000558609 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
CSHL1-208ENST00000558609 GIT2Q14161 759 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 HYIQ5T013 277 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 CDR2LQ86X02 465 aaPredicted RBP17.12■□□□□ 0.33
CSHL1-208ENST00000558609 COLGALT2Q8IYK4 626 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 DEPTORQ8TB45 409 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 IFT74Q96LB3 600 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 CCDC113Q9H0I3 377 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 NXF3Q9H4D5 531 aaKnown RBP17.12■□□□□ 0.33
CSHL1-208ENST00000558609 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
CSHL1-208ENST00000558609 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 ZMYM2Q9UBW7 1377 aa17.12■□□□□ 0.33
CSHL1-208ENST00000558609 MUC6Q6W4X9 2439 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 TTLL13PA6NNM8 815 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 NRP1O14786 923 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 PRKCBP05771 671 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 CTSAP10619 480 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 MLH1P40692 756 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 EFNA5P52803 228 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 DSC1Q08554 894 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
CSHL1-208ENST00000558609 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 ALYREFQ86V81 257 aaKnown RBP17.11■□□□□ 0.33
CSHL1-208ENST00000558609 ZFP42Q96MM3 310 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
CSHL1-208ENST00000558609 APOL6Q9BWW8 343 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 MIOSQ9NXC5 875 aa17.11■□□□□ 0.33
CSHL1-208ENST00000558609 VWA3AA6NCI4 1184 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 N4BP3O15049 544 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
CSHL1-208ENST00000558609 AKAP5P24588 427 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 SCNN1GP51170 649 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 ANKRD54Q6NXT1 300 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 C1orf186Q6ZWK4 172 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 DAW1Q8N136 415 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 GSTCDQ8NEC7 633 aa17.1■□□□□ 0.33
CSHL1-208ENST00000558609 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms