RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CCDC73Q6ZRK6 1079 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 KCNK18Q7Z418 384 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 SPRED2Q7Z698 418 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 SPPL3Q8TCT6 385 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 URGCPQ8TCY9 931 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 GDPD5Q8WTR4 605 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 ZNF558Q96NG5 402 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 PLIN2Q99541 437 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 RSAD1Q9HA92 442 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 KMT5AQ9NQR1 393 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 SPG21Q9NZD8 308 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 STK17AQ9UEE5 414 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 STK39Q9UEW8 545 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
TPM1-213ENST00000558400 LZTS1Q9Y250 596 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 GIT1Q9Y2X7 761 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
TPM1-213ENST00000558400 FSD2A1L4K1 749 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 NR1I2O75469 434 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 PRKCBP05771 671 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 PLS3P13797 630 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 ATF7P17544 494 aaPredicted RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 PLCG1P19174 1290 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 MRE11P49959 708 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 GATMP50440 423 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 RNASELQ05823 741 aaKnown RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 KARSQ15046 597 aaKnown RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 AMHR2Q16671 573 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 CLLU1OSQ5K130 101 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 UBXN11Q5T124 520 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 KCNT2Q6UVM3 1135 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 AGMOQ6ZNB7 445 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 SV2BQ7L1I2 683 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 THNSL1Q8IYQ7 743 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 KLHL23Q8NBE8 558 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 COLGALT1Q8NBJ5 622 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 SPRYD3Q8NCJ5 442 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 HELQQ8TDG4 1101 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 KCNG4Q8TDN1 519 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 BSNDQ8WZ55 320 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 LARP4BQ92615 738 aaKnown RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 RAD54LQ92698 747 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 KCNN1Q92952 543 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 HLA-CQ95604 372 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 CPB2Q96IY4 423 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 EPSTI1Q96J88 318 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 FAM193BQ96PV7 902 aaPredicted RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 LRRC27Q9C0I9 530 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 NSUN3Q9H649 340 aaKnown RBP9.34□□□□□ -0.91
TPM1-213ENST00000558400 CWH43Q9H720 699 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 RNF19AQ9NV58 838 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 IPPQ9Y573 584 aa9.34□□□□□ -0.91
TPM1-213ENST00000558400 LOXHD1Q8IVV2 1947 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 GRM6O15303 877 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 INPPL1O15357 1258 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 GPR37L1O60883 481 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 CUTAO60888 179 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 FGF18O76093 207 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 ITGB1P05556 798 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 GRIN1Q05586 938 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 STRN3Q13033 797 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 DCAF4L1Q3SXM0 396 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 ARSHQ5FYA8 562 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 DAW1Q8N136 415 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 SMG8Q8ND04 991 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 MICAL1Q8TDZ2 1067 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 POF1BQ8WVV4 589 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 LPPQ93052 612 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 CLIC6Q96NY7 704 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 PYM1Q9BRP8 204 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 MRPL4Q9BYD3 311 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 CCDC113Q9H0I3 377 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 PARVGQ9HBI0 331 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 POLD4Q9HCU8 107 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 ALG13Q9NP73 1137 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 C11orf16Q9NQ32 467 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 BLOC1S4Q9NUP1 217 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 TBC1D13Q9NVG8 400 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 ARHGAP28Q9P2N2 729 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 TNFSF13BQ9Y275 285 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 PRRC2BQ5JSZ5 2229 aaKnown RBP9.33□□□□□ -0.92
TPM1-213ENST00000558400 ZMYM2Q9UBW7 1377 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 SIP14410 1827 aa9.33□□□□□ -0.92
TPM1-213ENST00000558400 RBAK-RBAKDNI3L0D1 243 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 B4GALT5O43286 388 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 FAM13AO94988 1023 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 NPTXRO95502 500 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 GALTP07902 379 aa9.32□□□□□ -0.92
TPM1-213ENST00000558400 LIG1P18858 919 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms