RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SLC11A1P49279 550 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 CLCN5P51795 746 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 TBC1D8BQ0IIM8 1120 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 BMS1Q14692 1282 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 INF2Q27J81 1249 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 CWF19L1Q69YN2 538 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 GAS2L3Q86XJ1 694 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 SH2D3AQ9BRG2 576 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 FDXACB1Q9BRP7 624 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 CYP26B1Q9NR63 512 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 CHST12Q9NRB3 414 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 DNAJB4Q9UDY4 337 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 ZNF292O60281 2723 aa12.45□□□□□ -0.42
RABGGTA-204ENST00000558376 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 SYCE3A1L190 88 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 CHMP2AO43633 222 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 YEATS4O95619 227 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 NOMO2Q5JPE7 1267 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 ZNF280BQ86YH2 543 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 CCDC148Q8NFR7 591 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 RIT2Q99578 217 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 NIFKQ9BYG3 293 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 INPP5FQ9Y2H2 1132 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 IGKV6-21A0A0C4DH24 114 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 GAS7O60861 476 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 GNA11P29992 359 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 MCM7P33993 719 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 ADALQ6DHV7 355 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 GPR149Q86SP6 731 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 CABP7Q86V35 215 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 FLCNQ8NFG4 579 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 KLHL5Q96PQ7 755 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 GBP3Q9H0R5 595 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 MFSD1Q9H3U5 465 aa12.44□□□□□ -0.42
RABGGTA-204ENST00000558376 CCDC194A0A1B0GVG4 234 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 LILRB3O75022 631 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 ZNF623O75123 536 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 DDHD2O94830 711 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 SFNP31947 248 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 JAK3P52333 1124 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 GIT2Q14161 759 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 GLB1LQ6UWU2 654 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 FSIP1Q8NA03 581 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 DAGLBQ8NCG7 672 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 SUCLA2Q9P2R7 463 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 SEPT9Q9UHD8 586 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 PIN4Q9Y237 131 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-204ENST00000558376 DCHS1Q96JQ0 3298 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 PSMD10O75832 226 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 CNPP09543 421 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 USP11P51784 963 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 NDUFA8P51970 172 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 PTGDRQ13258 359 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 SNW1Q13573 536 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 B3GNT9Q6UX72 402 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 AGMOQ6ZNB7 445 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 NKD2Q969F2 451 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 DOCK6Q96HP0 2047 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 AOC1P19801 751 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 CLCN4P51793 760 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 CDC42EP1Q00587 391 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 FOXK2Q01167 660 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 RNASELQ05823 741 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 TDGQ13569 410 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 USP49Q70CQ1 688 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 SFXN1Q9H9B4 322 aa12.42□□□□□ -0.42
RABGGTA-204ENST00000558376 KCNK12Q9HB15 430 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms