RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CXCL14O95715 111 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
HERC1-202ENST00000558324 SCNN1GP51170 649 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
HERC1-202ENST00000558324 TMEM31Q5JXX7 168 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 ANKRD54Q6NXT1 300 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
HERC1-202ENST00000558324 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 MRPL43Q8N983 215 aaKnown RBP13.2□□□□□ -0.3
HERC1-202ENST00000558324 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 LRFN3Q9BTN0 628 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
HERC1-202ENST00000558324 KANSL3Q9P2N6 904 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 KIAA1024Q9UPX6 916 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
HERC1-202ENST00000558324 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
HERC1-202ENST00000558324 BDP1A6H8Y1 2624 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 CLASP2O75122 1294 aaKnown RBP13.19□□□□□ -0.3
HERC1-202ENST00000558324 CYP11B2P19099 503 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 AKAP5P24588 427 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 CDC25AP30304 524 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 OR1G1P47890 313 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 KCNC3Q14003 757 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
HERC1-202ENST00000558324 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
HERC1-202ENST00000558324 KLK14Q9P0G3 267 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
HERC1-202ENST00000558324 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 TTLL13PA6NNM8 815 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 NRP1O14786 923 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 DCXO43602 365 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 ALDH2P05091 517 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 CTSAP10619 480 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 ALADP13716 330 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 SP100P23497 879 aaPredicted RBP13.18□□□□□ -0.3
HERC1-202ENST00000558324 IL17AQ16552 155 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 CDCA2Q69YH5 1023 aaPredicted RBP13.18□□□□□ -0.3
HERC1-202ENST00000558324 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 TMEM184AQ6ZMB5 413 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 CASP10Q92851 521 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
HERC1-202ENST00000558324 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
HERC1-202ENST00000558324 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 E9PMD0 336 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 F8W810 466 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 LAD1O00515 517 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 C2CD2LO14523 706 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 EDN1P05305 212 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PRKCBP05771 671 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 EPCAMP16422 314 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 MUTP22033 750 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 NAMPTP43490 491 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 MCM2P49736 904 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
HERC1-202ENST00000558324 PDIA5Q14554 519 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
HERC1-202ENST00000558324 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 MAPK6Q16659 721 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 COLGALT2Q8IYK4 626 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 SUSD6Q92537 303 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 RPS6KC1Q96S38 1066 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
HERC1-202ENST00000558324 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 FZD8Q9H461 694 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
HERC1-202ENST00000558324 NCOR1O75376 2440 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 INPPL1O15357 1258 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
HERC1-202ENST00000558324 PRPHP41219 470 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms