RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 LMBRD1Q9NUN5 540 aa8.18□□□□□ -1.1
ZEB1-210ENST00000557827 EBF1Q9UH73 591 aa8.18□□□□□ -1.1
ZEB1-210ENST00000557827 PCDHA3Q9Y5H8 950 aa8.18□□□□□ -1.1
ZEB1-210ENST00000557827 EIF3FO00303 357 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 MSL3P1P0C860 447 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 BRAFP15056 766 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 VEGFAP15692 232 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 RTP1P59025 263 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 MPP1Q00013 466 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 MGAT2Q10469 447 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 PRKG1Q13976 671 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 PFKFB4Q16877 469 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 ZACNQ401N2 412 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 CIAPIN1Q6FI81 312 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 FAM180BQ6P0A1 224 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 HEATR3Q7Z4Q2 680 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 GIMAP8Q8ND71 665 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 SNRNP27Q8WVK2 155 aaKnown RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 RPGRQ92834 1020 aaKnown RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 USP13Q92995 863 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 ZNF566Q969W8 418 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-210ENST00000557827 DMRTA2Q96SC8 542 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 RMDN3Q96TC7 470 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 MAGEH1Q9H213 219 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 C7orf69Q9H7B7 122 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 RASSF1Q9NS23 344 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 SMC4Q9NTJ3 1288 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 IMPACTQ9P2X3 320 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 CPNE7Q9UBL6 633 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 HDAC9Q9UKV0 1011 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 PCDHB6Q9Y5E3 794 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 PITPNM2Q9BZ72 1349 aa8.17□□□□□ -1.1
ZEB1-210ENST00000557827 A0A1W2PPC4 97 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 GOLGA6L3A6NEY3 463 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SGSM2O43147 1006 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 OPHN1O60890 802 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 F13BP05160 661 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 FAHP16930 419 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 MC4RP32245 332 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 KIR2DL1P43626 348 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 GPR15P49685 360 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SUMO3P55854 103 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 DBPQ10586 325 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 TAF5Q15542 800 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 TAF12Q16514 161 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 ITIH6Q6UXX5 1313 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 RFX8Q6ZV50 586 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 RHOT1Q8IXI2 618 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SH2D3CQ8N5H7 860 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 ARRDC4Q8NCT1 418 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 CLPTM1LQ96KA5 538 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 MSLNLQ96KJ4 702 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 FAM167AQ96KS9 214 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SEC62Q99442 399 aaKnown RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 OSBPL5Q9H0X9 879 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 RBM12Q9NTZ6 932 aaKnown RBP8.16□□□□□ -1.1
ZEB1-210ENST00000557827 PALD1Q9ULE6 856 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SIT1Q9Y3P8 196 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SNX11Q9Y5W9 270 aa8.16□□□□□ -1.1
ZEB1-210ENST00000557827 SGTAO43765 313 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 TYRP14679 529 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 FUT4P22083 530 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 POU5F1Q01860 360 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 PDE1CQ14123 709 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 SEPT2Q15019 361 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 KHDC1Q4VXA5 237 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 MILR1Q7Z6M3 343 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 DCP2Q8IU60 420 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 ATP11CQ8NB49 1132 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 TTLL11Q8NHH1 800 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 SORBS1Q9BX66 1292 aaKnown RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 SLC26A6Q9BXS9 759 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 STK33Q9BYT3 514 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 PITHD1Q9GZP4 211 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 AP5M1Q9H0R1 490 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 GJB4Q9NTQ9 266 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 LRFN1Q9P244 771 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 IFT80Q9P2H3 777 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-210ENST00000557827 FTSJ1Q9UET6 329 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 CPA4Q9UI42 421 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.1
ZEB1-210ENST00000557827 FAM171A2A8MVW0 826 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 FIBPO43427 364 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 USP2O75604 605 aaPredicted RBP8.14□□□□□ -1.11
ZEB1-210ENST00000557827 ARHGEF15O94989 841 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 MPIG6BO95866 241 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 CD4P01730 458 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 GLI4P10075 376 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 NPR1P16066 1061 aa8.14□□□□□ -1.11
ZEB1-210ENST00000557827 ITGA8P53708 1063 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms