RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
RCCD1-209ENST00000557750 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
RCCD1-209ENST00000557750 SEL1LQ9UBV2 794 aa13.47□□□□□ -0.25
RCCD1-209ENST00000557750 TET1Q8NFU7 2136 aa13.46□□□□□ -0.25
RCCD1-209ENST00000557750 PHLPP2Q6ZVD8 1323 aa13.46□□□□□ -0.25
RCCD1-209ENST00000557750 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
RCCD1-209ENST00000557750 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 H0YCG3 227 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 B4GALT5O43286 388 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 TSPAN1O60635 241 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 LPXNO60711 386 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 PRR29P0C7W0 189 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 NCKAP1LP55160 1127 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 STRN3Q13033 797 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 COASYQ13057 564 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.26
RCCD1-209ENST00000557750 POSTNQ15063 836 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 CNNM4Q6P4Q7 775 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 UNC13DQ70J99 1090 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 HAUS6Q7Z4H7 955 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 TIGD1Q96MW7 591 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 ADAM2Q99965 735 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 CCDC113Q9H0I3 377 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 FZD8Q9H461 694 aa13.46□□□□□ -0.26
RCCD1-209ENST00000557750 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.26
RCCD1-209ENST00000557750 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 MGEA5O60502 916 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 GCNT3O95395 438 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
RCCD1-209ENST00000557750 WDR5P61964 334 aaKnown RBP13.45□□□□□ -0.26
RCCD1-209ENST00000557750 AMHR2Q16671 573 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
RCCD1-209ENST00000557750 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
RCCD1-209ENST00000557750 TMCO2Q7Z6W1 182 aaPredicted RBP13.45□□□□□ -0.26
RCCD1-209ENST00000557750 MYOCDQ8IZQ8 938 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 LINC01599Q8WXQ3 324 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 FIZ1Q96SL8 496 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 TMEM134Q9H6X4 195 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 OLFML3Q9NRN5 406 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 USP20Q9Y2K6 914 aa13.45□□□□□ -0.26
RCCD1-209ENST00000557750 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 PVALEFA0A1B0GWK0 134 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ACKR2O00590 384 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ENPP3O14638 875 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 AMHP03971 560 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 MAPTP10636 758 aaKnown RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ARF4P18085 180 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 HOXA11P31270 313 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 PNOCQ13519 176 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 FAM187BQ17R55 369 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 NOTUMQ6P988 496 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 FAM43BQ6ZT52 329 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 RTN4RL1Q86UN2 441 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 HPS3Q969F9 1004 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 RGS18Q9NS28 235 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 CNTNAP2Q9UHC6 1331 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 RPN1P04843 607 aaKnown RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 SCP2P22307 547 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 AXLP30530 894 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ABCD1P33897 745 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 DEFB103AP81534 67 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 DPYDQ12882 1025 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 DSC3Q14574 896 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 FAM26FQ5R3K3 315 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 SLC24A5Q71RS6 500 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 ZNF720Q7Z2F6 126 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 CDR2LQ86X02 465 aaPredicted RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 CCDC47Q96A33 483 aaKnown RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 BICD1Q96G01 975 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 MRPL4Q9BYD3 311 aaKnown RBP13.44□□□□□ -0.26
RCCD1-209ENST00000557750 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
RCCD1-209ENST00000557750 SIP14410 1827 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 UPP2O95045 317 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 EDN1P05305 212 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 MYBP10242 640 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 CASP5P51878 434 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 TMEM31Q5JXX7 168 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 STXBP4Q6ZWJ1 553 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 ERCC4Q92889 916 aaPredicted RBP13.43□□□□□ -0.26
RCCD1-209ENST00000557750 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 TARS2Q9BW92 718 aaKnown RBP13.43□□□□□ -0.26
RCCD1-209ENST00000557750 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
RCCD1-209ENST00000557750 ST6GALNAC4Q9H4F1 302 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 TBX20Q9UMR3 447 aa13.43□□□□□ -0.26
RCCD1-209ENST00000557750 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms