RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 STRA6Q9BX79 667 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 IFIH1Q9BYX4 1025 aaKnown RBP9.97□□□□□ -0.81
CHD8-214ENST00000557727 TRIM9Q9C026 710 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 ODF2LQ9ULJ1 636 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 ST3GAL5Q9UNP4 418 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 GINS2Q9Y248 185 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 CDH23Q9H251 3354 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 CHD7Q9P2D1 2997 aa9.97□□□□□ -0.81
CHD8-214ENST00000557727 RALGAPA2Q2PPJ7 1873 aa9.96□□□□□ -0.81
CHD8-214ENST00000557727 ATG2AQ2TAZ0 1938 aa9.96□□□□□ -0.81
CHD8-214ENST00000557727 M0QZ92 97 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 KLRC4O43908 158 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 ZNF202O95125 648 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 PLS3P13797 630 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 SYKP43405 635 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 GCGRP47871 477 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 CDC42EP1Q00587 391 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 CUL4BQ13620 913 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 PSRC1Q6PGN9 363 aaPredicted RBP9.96□□□□□ -0.82
CHD8-214ENST00000557727 SV2BQ7L1I2 683 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 OTOP2Q7RTS6 562 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 DYMQ7RTS9 669 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 RPUSD2Q8IZ73 545 aaKnown RBP9.96□□□□□ -0.82
CHD8-214ENST00000557727 TMEM161BQ8NDZ6 487 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 PAGE5Q96GU1 130 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 DRC1Q96MC2 740 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 GCOM2Q9BZD3 368 aaPredicted RBP9.96□□□□□ -0.82
CHD8-214ENST00000557727 FZD8Q9H461 694 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 C17orf75Q9HAS0 396 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 MAGEF1Q9HAY2 307 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
CHD8-214ENST00000557727 TDRD15B5MCY1 1934 aaKnown RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 ABLIM1O14639 778 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 B4GALT5O43286 388 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 TSPAN1O60635 241 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 RPS6KA5O75582 802 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 BAIAP3O94812 1187 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 MAPTP10636 758 aaKnown RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 ATF7P17544 494 aaPredicted RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 PHKA2P46019 1235 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 NCKAP1LP55160 1127 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 PEX3P56589 373 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 WDR5P61964 334 aaKnown RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 DEFB103AP81534 67 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 FAM160A1Q05DH4 1040 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 PAK2Q13177 524 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 FAM187BQ17R55 369 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 UBXN11Q5T124 520 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 FAM109BQ6ICB4 259 aaPredicted RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.821e-6■■□□□ 12.3
CHD8-214ENST00000557727 KRBA2Q6ZNG9 492 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 SFR1Q86XK3 245 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 GLIS3Q8NEA6 775 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 SEPT8Q92599 483 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 APBB2Q92870 758 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 UBE2OQ9C0C9 1292 aaKnown RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 BLZF1Q9H2G9 400 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
CHD8-214ENST00000557727 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 USP25Q9UHP3 1055 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 USP20Q9Y2K6 914 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 TRANK1O15050 2925 aa9.95□□□□□ -0.82
CHD8-214ENST00000557727 CNTNAP2Q9UHC6 1331 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 ABHD14A-ACY1A0A1B0GW23 586 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 LRRIQ4A6NIV6 560 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 C9IYK1 514 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 ENPP3O14638 875 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 SLC16A4O15374 487 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PRPF40AO75400 957 aaKnown RBP9.94□□□□□ -0.82
CHD8-214ENST00000557727 FGBP02675 491 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 ARF4P18085 180 aaPredicted RBP9.94□□□□□ -0.82
CHD8-214ENST00000557727 AFMP43652 599 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 CASP5P51878 434 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 UBE2HP62256 183 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 FAM189BP81408 668 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 DPYDQ12882 1025 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 TFDP1Q14186 410 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PPP2R5AQ15172 486 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 TMCO2Q7Z6W1 182 aaPredicted RBP9.94□□□□□ -0.82
CHD8-214ENST00000557727 TDHQ8IZJ6 230 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 FAM160A2Q8N612 972 aaPredicted RBP9.94□□□□□ -0.82
CHD8-214ENST00000557727 HPS3Q969F9 1004 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PYM1Q9BRP8 204 aaKnown RBP9.94□□□□□ -0.82
CHD8-214ENST00000557727 TRAIPQ9BWF2 469 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 ST6GALNAC4Q9H4F1 302 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PARVGQ9HBI0 331 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 OLFML3Q9NRN5 406 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 RGS18Q9NS28 235 aa9.94□□□□□ -0.82
CHD8-214ENST00000557727 PHLPP2Q6ZVD8 1323 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 A0A1B0GUA9 196 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 GPR182O15218 404 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 PROZP22891 400 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 SFPQP23246 707 aaKnown RBP eCLIP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms