RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CHRNA5P30532 468 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 PEX5P50542 639 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 LMNB2Q03252 620 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 CNGA2Q16280 664 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 SYDE2Q5VT97 1194 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 HIBCHQ6NVY1 386 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-232ENST00000557487 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-232ENST00000557487 SP8Q8IXZ3 490 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 LMO3Q8TAP4 145 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 HOOK2Q96ED9 719 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 FIZ1Q96SL8 496 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 P2RX7Q99572 595 aaKnown RBP17.52■□□□□ 0.4
SHMT2-232ENST00000557487 SEMA4AQ9H3S1 761 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 NOD2Q9HC29 1040 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 WHRNQ9P202 907 aa17.52■□□□□ 0.4
SHMT2-232ENST00000557487 H0YIN7 160 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 O00370 1275 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 EML1O00423 815 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 VIMP08670 466 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MAPTP10636 758 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 COILP38432 576 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 CALCOCO2Q13137 446 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 AUHQ13825 339 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 CRYMQ14894 314 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 CERKLQ49MI3 558 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 OTOP1Q7RTM1 612 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 LRRC4CQ9HCJ2 640 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 ANKRD31Q8N7Z5 1873 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 IGLV3-22A0A075B6J6 115 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 FOXN3O00409 490 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MAPK13O15264 365 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 GRIN3BO60391 1043 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 SNX3O60493 162 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 SLITRK3O94933 977 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 OAS1P00973 400 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MAN1A1P33908 653 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 IFI35P80217 286 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 ZNF268Q14587 947 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 PHLDB3Q6NSJ2 640 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 SLC13A5Q86YT5 568 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 C12orf56Q8IXR9 622 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MAIP1Q8WWC4 291 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 N4BP2L2Q92802 583 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 CD101Q93033 1021 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 PRMT1Q99873 361 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 ELAC2Q9BQ52 826 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MRIQ9BWK5 157 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 STRA6Q9BX79 667 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
SHMT2-232ENST00000557487 LRRC19Q9H756 370 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 TAS2R14Q9NYV8 317 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 RGL1Q9NZL6 768 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 TMOD4Q9NZQ9 345 aa17.51■□□□□ 0.39
SHMT2-232ENST00000557487 EXOC3O60645 756 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 ATP2C2O75185 946 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 PSMD10O75832 226 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 SUN1O94901 812 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 PRELPP51888 382 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 SLC8A3P57103 927 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 SNRPFP62306 86 aaKnown RBP17.5■□□□□ 0.39
SHMT2-232ENST00000557487 ARHGAP44Q17R89 818 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 ZNF568Q3ZCX4 644 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 ADAT2Q7Z6V5 191 aaKnown RBP17.5■□□□□ 0.39
SHMT2-232ENST00000557487 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 TMEM206Q9H813 350 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 EHMT1Q9H9B1 1298 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
SHMT2-232ENST00000557487 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
SHMT2-232ENST00000557487 ECEL1O95672 775 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 CYP2J2P51589 502 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 CAV1Q03135 178 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 ICA1Q05084 483 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 ZC2HC1CQ53FD0 456 aaPredicted RBP17.49■□□□□ 0.39
SHMT2-232ENST00000557487 LRCH2Q5VUJ6 765 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 TLDC1Q6P9B6 456 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 TPH2Q8IWU9 490 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 CCDC105Q8IYK2 499 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 IFT74Q96LB3 600 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 EBF2Q9HAK2 575 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 UVRAGQ9P2Y5 699 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 ZNF536O15090 1300 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
SHMT2-232ENST00000557487 SFI1A8K8P3 1242 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 F5H6K3 240 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 TCEA3O75764 348 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 TRIM49P0CI25 452 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 TRIM49CP0CI26 452 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 ALADP13716 330 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 COMTP21964 271 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 COPB2P35606 906 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
SHMT2-232ENST00000557487 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
SHMT2-232ENST00000557487 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms