RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GLB1L2Q8IW92 636 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 GLB1L3Q8NCI6 653 aaPredicted RBP6.07□□□□□ -1.44
VRK1-207ENST00000557352 OR52N2Q8NGI0 321 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 CPT1CQ8TCG5 803 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 RSAD2Q8WXG1 361 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 SLC5A5Q92911 643 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 LSM14BQ9BX40 385 aaKnown RBP6.07□□□□□ -1.44
VRK1-207ENST00000557352 PRDM12Q9H4Q4 367 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
VRK1-207ENST00000557352 FZD1Q9UP38 647 aa6.07□□□□□ -1.44
VRK1-207ENST00000557352 TMEM191CA6NGB0 347 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 GZMKP49863 264 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 TRIM25Q14258 630 aaKnown RBP6.06□□□□□ -1.44
VRK1-207ENST00000557352 VPS72Q15906 364 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 LAIR1Q6GTX8 287 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 CCDC62Q6P9F0 684 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 DOK3Q7L591 496 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 RASSF3Q86WH2 238 aa6.06□□□□□ -1.44
VRK1-207ENST00000557352 TRIM24O15164 1050 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 PDE8AO60658 829 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 SCAF4O95104 1147 aaKnown RBP6.05□□□□□ -1.44
VRK1-207ENST00000557352 ITGB1P05556 798 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 MYCLP1P12525 358 aaPredicted RBP6.05□□□□□ -1.44
VRK1-207ENST00000557352 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 XYLT1Q86Y38 959 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 SYNE4Q8N205 404 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 OR14C36Q8NHC7 312 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 MLST8Q9BVC4 326 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 MAPRE3Q9UPY8 281 aa6.05□□□□□ -1.44
VRK1-207ENST00000557352 NOC2LQ9Y3T9 749 aaKnown RBP6.05□□□□□ -1.44
VRK1-207ENST00000557352 AHRRA9YTQ3 701 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 ENPP3O14638 875 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 RECQL4O94761 1208 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 LTA4HP09960 611 aaKnown RBP6.04□□□□□ -1.44
VRK1-207ENST00000557352 GYPEP15421 78 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 BPIP17213 487 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 ZFP36P26651 326 aaKnown RBP6.04□□□□□ -1.44
VRK1-207ENST00000557352 ATP13A4Q4VNC1 1196 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 ABHD15Q6UXT9 468 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 GPRIN1Q7Z2K8 1008 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 NDC1Q9BTX1 674 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 KCNH6Q9H252 994 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 ZNF768Q9H5H4 540 aaKnown RBP6.04□□□□□ -1.44
VRK1-207ENST00000557352 EIF2B4Q9UI10 523 aaKnown RBP6.04□□□□□ -1.44
VRK1-207ENST00000557352 HDAC5Q9UQL6 1122 aa6.04□□□□□ -1.44
VRK1-207ENST00000557352 PRAMEF4O60810 478 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 TMEM127O75204 238 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 ABHD16AO95870 558 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 LPLP06858 475 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 COL10A1Q03692 680 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 FSTL1Q12841 308 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 PDCD1Q15116 288 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 DHCR24Q15392 516 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 C19orf54Q5BKX5 351 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 CT83Q5H943 113 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 LY6G5CQ5SRR4 150 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 MBNL2Q5VZF2 373 aaKnown RBP6.03□□□□□ -1.44
VRK1-207ENST00000557352 LRRC55Q6ZSA7 311 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 ZNF575Q86XF7 245 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 VRK3Q8IV63 474 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 PROKR1Q8TCW9 393 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 FAM193BQ96PV7 902 aaPredicted RBP6.03□□□□□ -1.44
VRK1-207ENST00000557352 KCTD10Q9H3F6 313 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 HS3ST4Q9Y661 456 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 CDY2AQ9Y6F7 541 aa6.03□□□□□ -1.44
VRK1-207ENST00000557352 PPFIA4O75335 1185 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
VRK1-207ENST00000557352 APOBEC3AP31941 199 aaPredicted RBP6.02□□□□□ -1.45
VRK1-207ENST00000557352 LGALS4P56470 323 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 NANOS3P60323 173 aaKnown RBP6.02□□□□□ -1.45
VRK1-207ENST00000557352 MEF2AQ02078 507 aaPredicted RBP6.02□□□□□ -1.45
VRK1-207ENST00000557352 APBA1Q02410 837 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 KRTAP1-1Q07627 177 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 CSRP2Q16527 193 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 IQSEC1Q6DN90 963 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 KCNV1Q6PIU1 500 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 LILRA3Q8N6C8 439 aaPredicted RBP6.02□□□□□ -1.45
VRK1-207ENST00000557352 SNX33Q8WV41 574 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 USP7Q93009 1102 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 ZMYM3Q14202 1370 aa6.02□□□□□ -1.45
VRK1-207ENST00000557352 PRR5-ARHGAP8B1AHC4 643 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 LEFTY2O00292 366 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 TGM1P22735 817 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 ID4P47928 161 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 GYS2P54840 703 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 FAM189BP81408 668 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 PTPAQ15257 358 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 TIGD2Q4W5G0 525 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 PLEKHG4Q58EX7 1191 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 EAF2Q96CJ1 260 aaPredicted RBP6.01□□□□□ -1.45
VRK1-207ENST00000557352 ZG16BQ96DA0 208 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 CDC5LQ99459 802 aaKnown RBP6.01□□□□□ -1.45
VRK1-207ENST00000557352 SLC46A2Q9BY10 475 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 TOPORSQ9NS56 1045 aaPredicted RBP6.01□□□□□ -1.45
VRK1-207ENST00000557352 CLCA2Q9UQC9 943 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 TBX22Q9Y458 520 aa6.01□□□□□ -1.45
VRK1-207ENST00000557352 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms