RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ALDH2P05091 517 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 SRGAP2BP0DMP2 458 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 PLA2G5P39877 138 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 RBM10P98175 930 aaKnown RBP25.1■■□□□ 1.61
TMEM260-214ENST00000556975 MCTP1Q6DN14 999 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 VPS52Q8N1B4 723 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 POP1Q99575 1024 aaKnown RBP25.1■■□□□ 1.61
TMEM260-214ENST00000556975 LRFN3Q9BTN0 628 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 ZBP1Q9H171 429 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 C2orf40Q9H1Z8 148 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 RNF39Q9H2S5 420 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 STK39Q9UEW8 545 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 KIAA1024Q9UPX6 916 aa25.1■■□□□ 1.61
TMEM260-214ENST00000556975 B4GALT5O43286 388 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 CXCL14O95715 111 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 CTSAP10619 480 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 GIT2Q14161 759 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 IL17AQ16552 155 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 TMEM31Q5JXX7 168 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 SLC27A1Q6PCB7 646 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 ZBTB8OSQ8IWT0 167 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 BCL7CQ8WUZ0 217 aaPredicted RBP25.09■■□□□ 1.61
TMEM260-214ENST00000556975 FAM193BQ96PV7 902 aaPredicted RBP25.09■■□□□ 1.61
TMEM260-214ENST00000556975 GBP3Q9H0R5 595 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 BHMT2Q9H2M3 363 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 GIT1Q9Y2X7 761 aa25.09■■□□□ 1.61
TMEM260-214ENST00000556975 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.09■■□□□ 1.61
TMEM260-214ENST00000556975 ARL5CA6NH57 179 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 H3BQV1 296 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 POMCP01189 267 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 NAMPTP43490 491 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 DTHD1Q6ZMT9 781 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 HACE1Q8IYU2 909 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 SNX29Q8TEQ0 813 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 BSNDQ8WZ55 320 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 GAD1Q99259 594 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 TRIM6Q9C030 488 aaPredicted RBP25.08■■□□□ 1.61
TMEM260-214ENST00000556975 DDX19AQ9NUU7 478 aaKnown RBP25.08■■□□□ 1.61
TMEM260-214ENST00000556975 SMC3Q9UQE7 1217 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 FAN1Q9Y2M0 1017 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 HES2Q9Y543 173 aa25.08■■□□□ 1.61
TMEM260-214ENST00000556975 FAM86C2PA6NEL3 165 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 HOXB8P17481 243 aaPredicted RBP25.07■■□□□ 1.6
TMEM260-214ENST00000556975 ATP2C1P98194 919 aaPredicted RBP25.07■■□□□ 1.6
TMEM260-214ENST00000556975 PPP2R5AQ15172 486 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 KRT79Q5XKE5 535 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 ANKRD54Q6NXT1 300 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 SUSD6Q92537 303 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 S1PR5Q9H228 398 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 MIOSQ9NXC5 875 aa25.07■■□□□ 1.6
TMEM260-214ENST00000556975 DAXXQ9UER7 740 aaPredicted RBP25.07■■□□□ 1.6
TMEM260-214ENST00000556975 USP15Q9Y4E8 981 aaPredicted RBP25.07■■□□□ 1.6
TMEM260-214ENST00000556975 ZMYM2Q9UBW7 1377 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 PIEZO1Q92508 2521 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 NRP1O14786 923 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 GPR37L1O60883 481 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 CLASP2O75122 1294 aaKnown RBP25.06■■□□□ 1.6
TMEM260-214ENST00000556975 ALADP13716 330 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 DSC1Q08554 894 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 SYCE2Q6PIF2 218 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 COLGALT2Q8IYK4 626 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 KIFAP3Q92845 792 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 CASP10Q92851 521 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 VN1R3Q9BXE9 311 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 NXF3Q9H4D5 531 aaKnown RBP25.06■■□□□ 1.6
TMEM260-214ENST00000556975 DNM3Q9UQ16 869 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 HCN4Q9Y3Q4 1203 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 HCFC2Q9Y5Z7 792 aa25.06■■□□□ 1.6
TMEM260-214ENST00000556975 NPTXRO95502 500 aa25.05■■□□□ 1.6
TMEM260-214ENST00000556975 MLH1P40692 756 aa25.05■■□□□ 1.6
TMEM260-214ENST00000556975 MAPK6Q16659 721 aa25.05■■□□□ 1.6
TMEM260-214ENST00000556975 CDR2LQ86X02 465 aaPredicted RBP25.05■■□□□ 1.6
TMEM260-214ENST00000556975 GSTCDQ8NEC7 633 aa25.05■■□□□ 1.6
TMEM260-214ENST00000556975 MMTAG2Q9BU76 263 aaKnown RBP25.05■■□□□ 1.6
TMEM260-214ENST00000556975 CCDC113Q9H0I3 377 aa25.05■■□□□ 1.6
TMEM260-214ENST00000556975 PP2D1A8MPX8 630 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 ACKR2O00590 384 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 LARP1BQ659C4 914 aaKnown RBP25.04■■□□□ 1.6
TMEM260-214ENST00000556975 ARL6IP4Q66PJ3 421 aaKnown RBP25.04■■□□□ 1.6
TMEM260-214ENST00000556975 LLGL2Q6P1M3 1020 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 KCTD17Q8N5Z5 321 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 DEPTORQ8TB45 409 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 IFT74Q96LB3 600 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 ZFP42Q96MM3 310 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 PHF7Q9BWX1 381 aaPredicted RBP25.04■■□□□ 1.6
TMEM260-214ENST00000556975 C11orf16Q9NQ32 467 aa25.04■■□□□ 1.6
TMEM260-214ENST00000556975 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.03■■□□□ 1.6
TMEM260-214ENST00000556975 LOC730098B7Z3J9 87 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 E9PMD0 336 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 N4BP3O15049 544 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 CDC25AP30304 524 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 SCNN1GP51170 649 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 EFNA5P52803 228 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 PRPF4BQ13523 1007 aaKnown RBP25.03■■□□□ 1.6
TMEM260-214ENST00000556975 CUL4AQ13619 759 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 HYIQ5T013 277 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 AUTS2Q8WXX7 1259 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 APOL6Q9BWW8 343 aa25.03■■□□□ 1.6
TMEM260-214ENST00000556975 TTLL13PA6NNM8 815 aa25.02■■□□□ 1.6
TMEM260-214ENST00000556975 DCXO43602 365 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms