RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 STRN3Q13033 797 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 NOMO2Q5JPE7 1267 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 CLLU1OSQ5K130 101 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 RRAGBQ5VZM2 374 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 LRRC55Q6ZSA7 311 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 ZNF598Q86UK7 904 aaKnown RBP15.53■□□□□ 0.08
SLIRP-207ENST00000556831 COLGALT1Q8NBJ5 622 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 BSNDQ8WZ55 320 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 LARP4BQ92615 738 aaKnown RBP15.53■□□□□ 0.08
SLIRP-207ENST00000556831 CASD1Q96PB1 797 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 CCSER1Q9C0I3 900 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 LARSQ9P2J5 1176 aaKnown RBP15.53■□□□□ 0.08
SLIRP-207ENST00000556831 STK17AQ9UEE5 414 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 DAXXQ9UER7 740 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-207ENST00000556831 PUF60Q9UHX1 559 aaKnown RBP15.53■□□□□ 0.08
SLIRP-207ENST00000556831 PCDHGC5Q9Y5F6 944 aa15.53■□□□□ 0.08
SLIRP-207ENST00000556831 B4GALT5O43286 388 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ZC3H11AO75152 810 aaKnown RBP eCLIP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 FAM13AO94988 1023 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 NPTXRO95502 500 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 YEATS4O95619 227 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 NCLP19338 710 aaKnown RBP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 PBX3P40426 434 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ALDH7A1P49419 539 aaKnown RBP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 SLC12A3P55017 1021 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 KRT17Q04695 432 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 GRIN1Q05586 938 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 CAMK1Q14012 370 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 FAM187BQ17R55 369 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 SPECC1Q5M775 1068 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ATL3Q6DD88 541 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 C1orf186Q6ZWK4 172 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 KLHL23Q8NBE8 558 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 RAD54LQ92698 747 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 RPS6KC1Q96S38 1066 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 KIFC3Q9BVG8 833 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 APOL6Q9BWW8 343 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 GBP3Q9H0R5 595 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ZHX3Q9H4I2 956 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 NSUN3Q9H649 340 aaKnown RBP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 KANSL3Q9P2N6 904 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ODF2LQ9ULJ1 636 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 USP20Q9Y2K6 914 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 IPPQ9Y573 584 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ATP6V1DQ9Y5K8 247 aa15.52■□□□□ 0.08
SLIRP-207ENST00000556831 MORC2Q9Y6X9 1032 aaPredicted RBP15.52■□□□□ 0.08
SLIRP-207ENST00000556831 ACKR2O00590 384 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 NR1I2O75469 434 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 EDN1P05305 212 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 PLS3P13797 630 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 STAT6P42226 847 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 NPTX2P47972 431 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 UBE3AQ05086 875 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
SLIRP-207ENST00000556831 AMHR2Q16671 573 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 AAK1Q2M2I8 961 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 DCAF4L1Q3SXM0 396 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 KCNT2Q6UVM3 1135 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 MRPL10Q7Z7H8 261 aaKnown RBP15.51■□□□□ 0.07
SLIRP-207ENST00000556831 LINC00301Q8NCQ3 95 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 MICAL1Q8TDZ2 1067 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 LRRC15Q8TF66 581 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 EPSTI1Q96J88 318 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 CLIC6Q96NY7 704 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 EIF2AQ9BY44 585 aaKnown RBP15.51■□□□□ 0.07
SLIRP-207ENST00000556831 MRPL4Q9BYD3 311 aaKnown RBP15.51■□□□□ 0.07
SLIRP-207ENST00000556831 FZD8Q9H461 694 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 CWH43Q9H720 699 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
SLIRP-207ENST00000556831 PARP2Q9UGN5 583 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 PLAGL2Q9UPG8 496 aa15.51■□□□□ 0.07
SLIRP-207ENST00000556831 A0A1B0GUA9 196 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 TTLL13PA6NNM8 815 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 B4GALT3O60512 393 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 PPP6R2O75170 966 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 FGF18O76093 207 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 ITGB1P05556 798 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
SLIRP-207ENST00000556831 ME1P48163 572 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 AFF1P51825 1210 aaKnown RBP15.5■□□□□ 0.07
SLIRP-207ENST00000556831 MCM6Q14566 821 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 ATF7IP2Q5U623 682 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 CDR2LQ86X02 465 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-207ENST00000556831 POF1BQ8WVV4 589 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 CCDC113Q9H0I3 377 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 KCNH6Q9H252 994 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 SPG21Q9NZD8 308 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 COG5Q9UP83 839 aa15.5■□□□□ 0.07
SLIRP-207ENST00000556831 MYH11P35749 1972 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 PKD1L2Q7Z442 2459 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 SFI1A8K8P3 1242 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 SLC16A4O15374 487 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 CUTAO60888 179 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms