RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MORC3Q14149 939 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 SGSM1Q2NKQ1 1148 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 ANKDD1AQ495B1 522 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 FBXO43Q4G163 708 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 PLEKHO1Q53GL0 409 aaPredicted RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 MZT2BQ6NZ67 158 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 DRICH1Q6PGQ1 229 aaPredicted RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 KDELC1Q6UW63 502 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 CEP68Q76N32 757 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 ATG9AQ7Z3C6 839 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 RTKN2Q8IZC4 609 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 ZSCAN1Q8NBB4 408 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 XXYLT1Q8NBI6 393 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 DDX54Q8TDD1 881 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 WDR60Q8WVS4 1066 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 CNDP2Q96KP4 475 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 ART5Q96L15 291 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 GMLQ99445 158 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 TTC1Q99614 292 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 GAL3ST1Q99999 423 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 NAA15Q9BXJ9 866 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 YIPF3Q9GZM5 350 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 SRA1Q9HD15 236 aaKnown RBP6.68□□□□□ -1.34
TDP1-215ENST00000556498 PTPRHQ9HD43 1115 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 OSGEPQ9NPF4 335 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 UBN1Q9NPG3 1134 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 COPRSQ9NQ92 184 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 LUZP4Q9P127 313 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 FBXO10Q9UK96 956 aa6.68□□□□□ -1.34
TDP1-215ENST00000556498 POLA1P09884 1462 aaPredicted RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 ABCA10Q8WWZ4 1543 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PI4K2BG5E9Z4 385 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 TOR1BO14657 336 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 XPOTO43592 962 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 RASSF9O75901 435 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 LCA5LO95447 670 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ALDH2P05091 517 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ITGB3P05106 788 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 GSTA2P09210 222 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PTPN2P17706 415 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 BMP6P22004 513 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 CBX5P45973 191 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 TUFMP49411 452 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 ARL4DP49703 201 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 GBE1Q04446 702 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ZBTB16Q05516 673 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 RBL2Q08999 1139 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 E2F2Q14209 437 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 GNA13Q14344 377 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 SQLEQ14534 574 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 SLC14A2Q15849 920 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PDCD4Q53EL6 469 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 IL23RQ5VWK5 629 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ANO1Q5XXA6 986 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 TRIM68Q6AZZ1 485 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 SLC2A7Q6PXP3 512 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 KSR2Q6VAB6 950 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 MILR1Q7Z6M3 343 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 MAP4K3Q8IVH8 894 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 DTWD1Q8N5C7 304 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 CAMKK1Q8N5S9 505 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ANKRD42Q8N9B4 389 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 FAM71BQ8TC56 605 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PI4K2BQ8TCG2 481 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 KIFAP3Q92845 792 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PEX13Q92968 403 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 C11orf24Q96F05 449 aaPredicted RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 CCDC42Q96M95 316 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 RIOK1Q9BRS2 568 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 TGIF2Q9GZN2 237 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 FAM192AQ9GZU8 254 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 INTS2Q9H0H0 1204 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 EBF2Q9HAK2 575 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PREBQ9HCU5 417 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 ARFGAP3Q9NP61 516 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 PIH1D3Q9NQM4 214 aaKnown RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.67□□□□□ -1.34
TDP1-215ENST00000556498 VPS18Q9P253 973 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 L1RE1Q9UN81 338 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 TMEM5Q9Y2B1 443 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 CAB39Q9Y376 341 aaPredicted RBP6.67□□□□□ -1.34
TDP1-215ENST00000556498 MYO3BQ8WXR4 1341 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 MYOM3Q5VTT5 1437 aa6.67□□□□□ -1.34
TDP1-215ENST00000556498 CUX2O14529 1486 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CYP2D7A0A087X1C5 515 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 GPR75-ASB3A0A0A6YYF3 556 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 A6NCN8 305 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 A8MVJ9 347 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 K7ENM7 598 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 GNB5O14775 395 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 RNF113AO15541 343 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms