RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PPP2R5AQ15172 486 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 RESP18Q5W5W9 173 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 MRPL10Q7Z7H8 261 aaKnown RBP10.66□□□□□ -0.7
SRP54-210ENST00000556380 GPBP1Q86WP2 473 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 LARP4BQ92615 738 aaKnown RBP10.66□□□□□ -0.7
SRP54-210ENST00000556380 KCNN1Q92952 543 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 DRC1Q96MC2 740 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 C2orf40Q9H1Z8 148 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 C17orf75Q9HAS0 396 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 ARHGAP28Q9P2N2 729 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 PIN4Q9Y237 131 aaKnown RBP10.66□□□□□ -0.7
SRP54-210ENST00000556380 PCDHB7Q9Y5E2 793 aa10.66□□□□□ -0.7
SRP54-210ENST00000556380 A0A1B0GUA9 196 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 EPOPA6NHQ4 379 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 MYMKA6NI61 221 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 ACKR2O00590 384 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 B4GALT5O43286 388 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 PLS3P13797 630 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 ARF4P18085 180 aaPredicted RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 ME1P48163 572 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 EFNA5P52803 228 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 PEX3P56589 373 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 KRT85P78386 507 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 RAD51AP2Q09MP3 1159 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 DHX8Q14562 1220 aaKnown RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 TWF2Q6IBS0 349 aaKnown RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 TAS1R3Q7RTX0 852 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 CMTR2Q8IYT2 770 aaKnown RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 CLP1Q92989 425 aaKnown RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 DNAJC19Q96DA6 116 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 CCDC51Q96ER9 411 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 FAM161BQ96MY7 647 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 FIZ1Q96SL8 496 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 YME1L1Q96TA2 773 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 CDX2Q99626 313 aaPredicted RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 REEP2Q9BRK0 252 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 TMEM134Q9H6X4 195 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 PRMT7Q9NVM4 692 aaPredicted RBP10.65□□□□□ -0.7
SRP54-210ENST00000556380 USP20Q9Y2K6 914 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 PCDHB2Q9Y5E7 798 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 ATP6V1DQ9Y5K8 247 aa10.65□□□□□ -0.7
SRP54-210ENST00000556380 MYH15Q9Y2K3 1946 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 FAM237AA0A1B0GTK4 181 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 MEIS3P2A8K0S8 358 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 LPXNO60711 386 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 FGFR1P11362 822 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 CMA1P23946 247 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 TXLNAP40222 546 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 ADGRE1Q14246 886 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 MAPK6Q16659 721 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 ADALQ6DHV7 355 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 NOTUMQ6P988 496 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 LRRC55Q6ZSA7 311 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 SV2BQ7L1I2 683 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 ZBTB8OSQ8IWT0 167 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 SMG8Q8ND04 991 aaKnown RBP10.64□□□□□ -0.71
SRP54-210ENST00000556380 TMEM161BQ8NDZ6 487 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 RASSF8Q8NHQ8 419 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 DEPTORQ8TB45 409 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 TGS1Q96RS0 853 aaKnown RBP10.64□□□□□ -0.71
SRP54-210ENST00000556380 C17orf80Q9BSJ5 609 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 EIF2AQ9BY44 585 aaKnown RBP10.64□□□□□ -0.71
SRP54-210ENST00000556380 SCAND2PQ9GZW5 306 aaPredicted RBP10.64□□□□□ -0.71
SRP54-210ENST00000556380 PRDM12Q9H4Q4 367 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 CERS4Q9HA82 394 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 KBTBD4Q9NVX7 518 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 ODF2LQ9ULJ1 636 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
SRP54-210ENST00000556380 COL6A3P12111 3177 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 GBF1Q92538 1859 aa10.64□□□□□ -0.71
SRP54-210ENST00000556380 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 K7ERI5 159 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 SLC16A4O15374 487 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 OFD1O75665 1012 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 ERLIN2O94905 339 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 PRKCBP05771 671 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 MAPTP10636 758 aaKnown RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 SKIP12755 728 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 POU3F3P20264 500 aaPredicted RBP10.63□□□□□ -0.71
SRP54-210ENST00000556380 BMPR1AP36894 532 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 STAT6P42226 847 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 RAB27AP51159 221 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 NCKAP1LP55160 1127 aa10.63□□□□□ -0.71
SRP54-210ENST00000556380 NCBP1Q09161 790 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms