RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 C2CD2LO14523 706 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 SLC37A4O43826 429 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 MARCH6O60337 910 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 NR1I2O75469 434 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 GCFC2P16383 781 aaKnown RBP17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 TOB2Q14106 344 aaPredicted RBP17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 PPP4R3AQ6IN85 833 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 CCDC105Q8IYK2 499 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 SIX5Q8N196 739 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 HERC2P3Q9BVR0 1158 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 MINDY3Q9H8M7 445 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 VAV3Q9UKW4 847 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
SUPT16H-205ENST00000556217 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 CCDC195A0A1B0GUA6 201 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 GLUD1P00367 558 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 NPR3P17342 541 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 AXLP30530 894 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 GBP2P32456 591 aaPredicted RBP17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 OR1G1P47890 313 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 GLUD2P49448 558 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 AFF1P51825 1210 aaKnown RBP17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 PUM1Q14671 1186 aaKnown RBP eCLIP17.23■□□□□ 0.353e-6■□□□□ 10.7
SUPT16H-205ENST00000556217 EMC2Q15006 297 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 NPY5RQ15761 445 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 C4orf19Q8IY42 314 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 FEZF2Q8TBJ5 459 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 CCDC51Q96ER9 411 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 LXNQ9BS40 222 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 RHOBTB2Q9BYZ6 727 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 ZSWIM6Q9HCJ5 1215 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 PRG3Q9Y2Y8 225 aaPredicted RBP17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 CACNA1GO43497 2377 aa17.23■□□□□ 0.35
SUPT16H-205ENST00000556217 ACACBO00763 2458 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 TBX3O15119 743 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 TEX28O15482 410 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 KRT37O76014 449 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 LMNAP02545 664 aaKnown RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 XBP1P17861 261 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 RFX1P22670 979 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 MXD4Q14582 209 aaPredicted RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 EPHA7Q15375 998 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 XKR9Q5GH70 373 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 HACE1Q8IYU2 909 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 DTWD2Q8NBA8 298 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 MTRQ99707 1265 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 WDR6Q9NNW5 1121 aaKnown RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 BMP2KQ9NSY1 1161 aaPredicted RBP17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 IPPQ9Y573 584 aa17.22■□□□□ 0.35
SUPT16H-205ENST00000556217 CLUHO75153 1309 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 FRYLO94915 3013 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 ARL5CA6NH57 179 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 STK25O00506 426 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 INPPL1O15357 1258 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 EPB41L2O43491 1005 aaKnown RBP17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 PI15O43692 258 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 CDKL5O76039 1030 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 C1RP00736 705 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 STK3Q13188 491 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 TFDP1Q14186 410 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 NXPE3Q969Y0 559 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 ZSWIM4Q9H7M6 989 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 WRAP73Q9P2S5 460 aaPredicted RBP17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 KMT2BQ9UMN6 2715 aaPredicted RBP17.21■□□□□ 0.35
SUPT16H-205ENST00000556217 DNAH14Q0VDD8 3507 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 TSPAN1O60635 241 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 MLH1P40692 756 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 DSG1Q02413 1049 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 DSC1Q08554 894 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 KIAA0319Q5VV43 1072 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 NCAPH2Q6IBW4 605 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 TAS1R1Q7RTX1 841 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 SLFN12Q8IYM2 578 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 KIAA2013Q8IYS2 634 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 SMG7Q92540 1137 aaKnown RBP17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 GAD1Q99259 594 aa17.2■□□□□ 0.34
SUPT16H-205ENST00000556217 PHF20Q9BVI0 1012 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms