RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 UBE3CQ15386 1083 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-234ENST00000555958 OR5M3Q8NGP4 307 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 ZNF512Q96ME7 567 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-234ENST00000555958 CSRNP2Q9H175 543 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
ATXN3-234ENST00000555958 AURKAIP1Q9NWT8 199 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-234ENST00000555958 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 HOXA3O43365 443 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-234ENST00000555958 EYA4O95677 639 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 VIL1P09327 827 aaKnown RBP6.54□□□□□ -1.36
ATXN3-234ENST00000555958 CASRP41180 1078 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 DGCR2P98153 550 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 CRHR2Q13324 411 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 FSCN1Q16658 493 aaKnown RBP6.54□□□□□ -1.36
ATXN3-234ENST00000555958 IQSEC1Q6DN90 963 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 GLB1L2Q8IW92 636 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 CMIPQ8IY22 773 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 Q8N1X5 172 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
ATXN3-234ENST00000555958 NRP1O14786 923 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 STC2O76061 302 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 SCNN1GP51170 649 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 CNGB1Q14028 1251 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-234ENST00000555958 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 Q6ZRM9 215 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
ATXN3-234ENST00000555958 EPC1Q9H2F5 836 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 MAPKBP1O60336 1514 aa6.53□□□□□ -1.36
ATXN3-234ENST00000555958 PPRC1Q5VV67 1664 aaKnown RBP6.52□□□□□ -1.37
ATXN3-234ENST00000555958 FHAD1B1AJZ9 1412 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 FZD7O75084 574 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 C1SP09871 688 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
ATXN3-234ENST00000555958 ENPP1P22413 925 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 SCAND1P57086 179 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 TMPRSS15P98073 1019 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 DUSP2Q05923 314 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 FAPQ12884 760 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
ATXN3-234ENST00000555958 ZNF703Q9H7S9 590 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-234ENST00000555958 XDHP47989 1333 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 RUSC2Q8N2Y8 1516 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
ATXN3-234ENST00000555958 GNAT2P19087 354 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 GDF5P43026 501 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 PTH1RQ03431 593 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-234ENST00000555958 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
ATXN3-234ENST00000555958 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 USP51Q70EK9 711 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 MB21D1Q8N884 522 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
ATXN3-234ENST00000555958 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 PARPBPQ9NWS1 579 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
ATXN3-234ENST00000555958 PRAMEF4O60810 478 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
ATXN3-234ENST00000555958 CFBP00751 764 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 ACVRL1P37023 503 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 CDK17Q00537 523 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-234ENST00000555958 MNTQ99583 582 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-234ENST00000555958 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-234ENST00000555958 CEP72Q9P209 647 aa6.5□□□□□ -1.37
ATXN3-234ENST00000555958 GPR39O43194 453 aa6.49□□□□□ -1.37
ATXN3-234ENST00000555958 CTSSP25774 331 aa6.49□□□□□ -1.37
ATXN3-234ENST00000555958 GZMKP49863 264 aa6.49□□□□□ -1.37
ATXN3-234ENST00000555958 RABGGTBP53611 331 aa6.49□□□□□ -1.37
ATXN3-234ENST00000555958 WNT3AP56704 352 aa6.49□□□□□ -1.37
ATXN3-234ENST00000555958 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
ATXN3-234ENST00000555958 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
ATXN3-234ENST00000555958 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms