RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ERP44Q9BS26 406 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 SYT11Q9BT88 431 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 CELF4Q9BZC1 486 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 TRIM31Q9BZY9 425 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 THAP2Q9H0W7 228 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 NEUROG2Q9H2A3 272 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 BCAS3Q9H6U6 928 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 CNOT10Q9H9A5 744 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 UBE2TQ9NPD8 197 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.55□□□□□ -1.2
TDP1-213ENST00000555880 PARP2Q9UGN5 583 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 GGA2Q9UJY4 613 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 FEM1BQ9UK73 627 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ZBTB21Q9ULJ3 1066 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 NFS1Q9Y697 457 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 EMSYQ7Z589 1322 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 TCP10L2B9ZVM9 353 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 DDX39AO00148 427 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 MYO1FO00160 1098 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 FOXN3O00409 490 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 DDX3YO15523 660 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 PLA2G6O60733 806 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PPFIA2O75334 1257 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 GGPS1O95749 300 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ARP10275 920 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 CHRNA5P30532 468 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 CHRNA3P32297 505 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 VAMP7P51809 220 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 SNRPFP62306 86 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 GPC5P78333 572 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 RNF187Q5TA31 235 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 SEL1L2Q5TEA6 688 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ARMC9Q7Z3E5 817 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 CROCCP2Q86T23 111 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ANKK1Q8NFD2 765 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ACER1Q8TDN7 264 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MORC4Q8TE76 937 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PRMT6Q96LA8 375 aaPredicted RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PSMD1Q99460 953 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MXRA8Q9BRK3 442 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 TRIM51Q9BSJ1 452 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 GPR88Q9GZN0 384 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 TAOK3Q9H2K8 898 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 PPANQ9NQ55 473 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 WDR70Q9NW82 654 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 MTRF1LQ9UGC7 380 aaKnown RBP7.55□□□□□ -1.2
TDP1-213ENST00000555880 MTUS1Q9ULD2 1270 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 ATP8A1Q9Y2Q0 1164 aa7.55□□□□□ -1.2
TDP1-213ENST00000555880 IGSF9BQ9UPX0 1349 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 GMNCA6NCL1 334 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 TMEM110-MUSTN1A8MSY1 372 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 PODXLO00592 558 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 MAPK13O15264 365 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 PHF2O75151 1096 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 RTN2O75298 545 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 FTLP02792 175 aaPredicted RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 P4HBP07237 508 aaKnown RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 POLD1P28340 1107 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 SEC24CP53992 1094 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 MAPK7Q13164 816 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 DRP2Q13474 957 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 RRP1BQ14684 758 aaKnown RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 TCEAL1Q15170 157 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 KIAA1755Q5JYT7 1200 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 DUPD1Q68J44 220 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 SLC30A10Q6XR72 485 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 MMS22LQ6ZRQ5 1243 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 ADAT2Q7Z6V5 191 aaKnown RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 LDHDQ86WU2 507 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 ARHGEF26Q96DR7 871 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 RUNDC3BQ96NL0 473 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 RPS6KC1Q96S38 1066 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 TIPINQ9BVW5 301 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 STRA6Q9BX79 667 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 STMN4Q9H169 189 aaPredicted RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 VCPKMTQ9H867 229 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 WRAP73Q9P2S5 460 aaPredicted RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 DBR1Q9UK59 544 aaKnown RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 CCPG1Q9ULG6 757 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
TDP1-213ENST00000555880 EP400Q96L91 3159 aa7.54□□□□□ -1.2
TDP1-213ENST00000555880 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 SPDYE16A6NNV3 312 aaPredicted RBP7.53□□□□□ -1.2
TDP1-213ENST00000555880 PPIP5K2O43314 1243 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 TRAPPC3O43617 180 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 FSBPO95073 299 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 PLS3P13797 630 aa7.53□□□□□ -1.2
TDP1-213ENST00000555880 VCAM1P19320 739 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms