RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
SHMT2-221ENST00000555773 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
SHMT2-221ENST00000555773 ARID2Q68CP9 1835 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 N4BP3O15049 544 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 KIAA0391O15091 583 aaKnown RBP13.65□□□□□ -0.22
SHMT2-221ENST00000555773 CLDN3O15551 220 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 B4GALT5O43286 388 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 GARTP22102 1010 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 PROZP22891 400 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 ITGB8P26012 769 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 ZNF445P59923 1031 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 LRRC63Q05C16 580 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 PAK1Q13153 545 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 NFIL3Q16649 462 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 LRSAM1Q6UWE0 723 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 C12orf56Q8IXR9 622 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 NELFBQ8WX92 580 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 P2RX5Q93086 422 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 TSG101Q99816 390 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 TCHPQ9BT92 498 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 TRAIPQ9BWF2 469 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
SHMT2-221ENST00000555773 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 SKIP12755 728 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
SHMT2-221ENST00000555773 RGS19P49795 217 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 MCL1Q07820 350 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.233e-10■□□□□ 10.6
SHMT2-221ENST00000555773 KYAT1Q16773 422 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 DBF4BQ8NFT6 615 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
SHMT2-221ENST00000555773 PIN4Q9Y237 131 aaKnown RBP13.64□□□□□ -0.23
SHMT2-221ENST00000555773 A0A0B4J269 797 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 EDN1P05305 212 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 MCF2P10911 925 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 CSF2RAP15509 400 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 ADSSP30520 456 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 FKBP3Q00688 224 aaKnown RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 DSC3Q14574 896 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 DCAF4L1Q3SXM0 396 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 ZCWPW2Q504Y3 356 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 ARMCX5Q6P1M9 558 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 SLC39A4Q6P5W5 647 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 CNKSR3Q6P9H4 555 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 POMGNT1Q8WZA1 660 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 BADQ92934 168 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 CPB2Q96IY4 423 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 PDZD7Q9H5P4 517 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 KIAA1586Q9HCI6 787 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 RGS18Q9NS28 235 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 C1orf112Q9NSG2 853 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 DMAC2Q9NW81 257 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 USP20Q9Y2K6 914 aa13.63□□□□□ -0.23
SHMT2-221ENST00000555773 MKI67P46013 3256 aaKnown RBP13.63□□□□□ -0.23
SHMT2-221ENST00000555773 ZMYM2Q9UBW7 1377 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 A0A0U1RQF3 1178 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ENPP3O14638 875 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ABLIM1O14639 778 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 CETN3O15182 167 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 EFCAB14O75071 495 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ZNF623O75123 536 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 FGFR1OPO95684 399 aaKnown RBP13.62□□□□□ -0.23
SHMT2-221ENST00000555773 MATR3P43243 847 aaKnown RBP eCLIP13.62□□□□□ -0.23
SHMT2-221ENST00000555773 RAB27AP51159 221 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 FPGSQ05932 587 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ADAM9Q13443 819 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 IKBKEQ14164 716 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ZNF568Q3ZCX4 644 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ANO6Q4KMQ2 910 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 TWF2Q6IBS0 349 aaKnown RBP13.62□□□□□ -0.23
SHMT2-221ENST00000555773 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 DEFB128Q7Z7B8 93 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-221ENST00000555773 ADAM2Q99965 735 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-221ENST00000555773 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
SHMT2-221ENST00000555773 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms