RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 NFIL3Q16649 462 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 TSHZ1Q6ZSZ6 1077 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 LUZP1Q86V48 1076 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 CREBRFQ8IUR6 639 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 GLIS3Q8NEA6 775 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 DIS3LQ8TF46 1054 aaKnown RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 ALPK3Q96L96 1907 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 HTATIP2Q9BUP3 242 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 STRA6Q9BX79 667 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 FGFBP2Q9BYJ0 223 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 KCTD10Q9H3F6 313 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 IFT122Q9HBG6 1241 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 METTL14Q9HCE5 456 aaKnown RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 PIN4Q9Y237 131 aaKnown RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 TDRD15B5MCY1 1934 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 PES1O00541 588 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 CBFA2T2O43439 604 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 STX10O60499 249 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 SERPINC1P01008 464 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 HARSP12081 509 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 CKBP12277 381 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 MRE11P49959 708 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 CDK7P50613 346 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 PPP2R3AQ06190 1150 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 RBL2Q08999 1139 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 SLC27A1Q6PCB7 646 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 DHX40Q8IX18 779 aaKnown RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 C12orf56Q8IXR9 622 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 GPD1LQ8N335 351 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 XXYLT1Q8NBI6 393 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 ADAMTS10Q9H324 1103 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 FZD8Q9H461 694 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 PRDM5Q9NQX1 630 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-220ENST00000555634 AGPAT5Q9NUQ2 364 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 TMEM39AQ9NV64 488 aa12.23□□□□□ -0.45
SHMT2-220ENST00000555634 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 MICAL3Q7RTP6 2002 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 GOLGA6L6A8MZA4 724 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TSPAN1O60635 241 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 CD4P01730 458 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 MCF2P10911 925 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 SKIP12755 728 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 RFC2P35250 354 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 RAB27AP51159 221 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TLE2Q04725 743 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 NFX1Q12986 1120 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 HIC1Q14526 733 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 INTS8Q75QN2 995 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 APBB2Q92870 758 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 CCDC94Q9BW85 323 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TARS2Q9BW92 718 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 GRPEL1Q9HAV7 217 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 CHST12Q9NRB3 414 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 AGO2Q9UKV8 859 aaKnown RBP12.22□□□□□ -0.45
SHMT2-220ENST00000555634 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
SHMT2-220ENST00000555634 LTBP2Q14767 1821 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 CLIC2O15247 247 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 MAPK13O15264 365 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 OGTO15294 1046 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 GHRP10912 638 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
SHMT2-220ENST00000555634 MGAT3Q09327 533 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 KCNA1Q09470 495 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 CETN1Q12798 172 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 SURF1Q15526 300 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
SHMT2-220ENST00000555634 FKBP15Q5T1M5 1219 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 ZNF618Q5T7W0 954 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 ZBTB33Q86T24 672 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 SEPT8Q92599 483 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 IFIH1Q9BYX4 1025 aaKnown RBP12.21□□□□□ -0.45
SHMT2-220ENST00000555634 FANCLQ9NW38 375 aa12.21□□□□□ -0.45
SHMT2-220ENST00000555634 ZNF233A6NK53 670 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms