RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.88
SYNE2-217ENST00000555022 KCTD10Q9H3F6 313 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 OCEL1Q9H607 264 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 ARMCX1Q9P291 453 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.88
SYNE2-217ENST00000555022 DUOX1Q9NRD9 1551 aa9.52□□□□□ -0.88
SYNE2-217ENST00000555022 MYH3P11055 1940 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ZSCAN5DPP0CG00 497 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 EEF2P13639 858 aaKnown RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 AKR1B1P15121 316 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ITGA8P53708 1063 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DLG4P78352 724 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ZBTB16Q05516 673 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 EPHA7Q15375 998 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 TAF1BQ53T94 588 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DGKHQ86XP1 1220 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ANKMY2Q8IV38 441 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DNAJC9Q8WXX5 260 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 SLC35C1Q96A29 364 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 TBC1D10AQ9BXI6 508 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DENND2DQ9H6A0 471 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 VPS37BQ9H9H4 285 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 STXBP5LQ9Y2K9 1186 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 WASF2Q9Y6W5 498 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 SPEF2Q9C093 1822 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 LAD1O00515 517 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 PEX11AO75192 247 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 USP1O94782 785 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 STK10O94804 968 aaKnown RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF76P36508 570 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 PIK3CAP42336 1068 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 POU5F1Q01860 360 aaKnown RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 RRP1BQ14684 758 aaKnown RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 FAM182BQ5T319 152 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 EMC10Q5UCC4 262 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DSTYKQ6XUX3 929 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 PPM1KQ8N3J5 372 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 SLC5A5Q92911 643 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
SYNE2-217ENST00000555022 PSTPIP2Q9H939 334 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 MAGEF1Q9HAY2 307 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 TMEM165Q9HC07 324 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 SIX2Q9NPC8 291 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 LNPEPQ9UIQ6 1025 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 C1orf167Q5SNV9 1468 aa9.52□□□□□ -0.89
SYNE2-217ENST00000555022 EXOC3O60645 756 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 PHF2O75151 1096 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 NTSR2O95665 410 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 IFNB1P01574 187 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 ETS1P14921 441 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 KCNA3P22001 575 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 CA4P22748 312 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 ITPK1Q13572 414 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 LAMB3Q13751 1172 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 KNOP1Q1ED39 458 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 KHDC1Q4VXA5 237 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 MTDHQ86UE4 582 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 HOMEZQ8IX15 550 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 B4GALNT2Q8NHY0 566 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 DHX38Q92620 1227 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 ZNF653Q96CK0 615 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 LRRC37BQ96QE4 947 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 HERPUD2Q9BSE4 406 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 SHCBP1LQ9BZQ2 653 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 R3HDM2Q9Y2K5 976 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 FAM13AO94988 1023 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 SGPL1O95470 568 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 ECEL1O95672 775 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 SOX5P35711 763 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 PTGIRP43119 386 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 TCP10Q12799 353 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 KPNB1Q14974 876 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 FASTKD3Q14CZ7 662 aaKnown RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 RASIP1Q5U651 963 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 EPM2AIP1Q7L775 607 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 CATSPER3Q86XQ3 398 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 ARHGEF19Q8IW93 802 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 LRRC8CQ8TDW0 803 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 TTC1Q99614 292 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 BATF3Q9NR55 127 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 FBXO6Q9NRD1 293 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 NMRK1Q9NWW6 199 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 RHBDL2Q9NX52 303 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 CORO1CQ9ULV4 474 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-217ENST00000555022 NAALADL1Q9UQQ1 740 aa9.51□□□□□ -0.89
SYNE2-217ENST00000555022 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CYP26A1O43174 497 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 ATP9AO75110 1047 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 GSTA1P08263 222 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 VCAM1P19320 739 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PPP1R2P41236 205 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 SCNN1DP51172 638 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 C10orf76Q5T2E6 689 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms