RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SLC20A2Q08357 652 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 IER5Q5VY09 327 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 GPD1LQ8N335 351 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 SEMA4DQ92854 862 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 SAAL1Q96ER3 474 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 NFKBIZQ9BYH8 718 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 STK33Q9BYT3 514 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 KCNG1Q9UIX4 513 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 DUSP10Q9Y6W6 482 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 PTPRJQ12913 1337 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 CNTNAP2Q9UHC6 1331 aa9.69□□□□□ -0.86
TDP1-210ENST00000554976 VGLL3A8MV65 326 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 EXTL3O43909 919 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GH1P01241 217 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 ANXA13P27216 316 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GNG11P61952 73 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 PTK2Q05397 1052 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 NCBP1Q09161 790 aaKnown RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 KIF22Q14807 665 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 SLC18A3Q16572 532 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 DUSP28Q4G0W2 176 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 MARCH8Q5T0T0 291 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 CACNA2D4Q7Z3S7 1137 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 IFNLR1Q8IU57 520 aaPredicted RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 SLC7A3Q8WY07 619 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 IFT74Q96LB3 600 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 TINF2Q9BSI4 451 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GJD2Q9UKL4 321 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GNEQ9Y223 722 aaKnown RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 A0A0B4J269 797 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GOLGA8IPA6NC78 632 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GOLGA8JA6NMD2 632 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 KIAA0391O15091 583 aaKnown RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 N4BP1O75113 896 aaKnown RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 CASQ1P31415 396 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 GPC3P51654 580 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 LAMTOR4Q0VGL1 99 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 PSMD6Q15008 389 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 ASIC2Q16515 512 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 SLC9C1Q4G0N8 1177 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 RGMBQ6NW40 437 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 LNX1Q8TBB1 728 aaPredicted RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 CCDC42Q96M95 316 aa9.68□□□□□ -0.86
TDP1-210ENST00000554976 ZNF215Q9UL58 517 aaPredicted RBP9.68□□□□□ -0.86
TDP1-210ENST00000554976 A0A087X0T9 212 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 HBP1O60381 514 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 MMP3P08254 477 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 FAM228BP0C875 321 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 ZNF865P0CJ78 1059 aaPredicted RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 SOX5P35711 763 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 NLRP11P59045 1033 aaKnown RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 TCERG1LQ5VWI1 586 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TSC1Q92574 1164 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TMEM8AQ9HCN3 771 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 CPA4Q9UI42 421 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 DNAJC12Q9UKB3 198 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 MEFVO15553 781 aaPredicted RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 IQCF3P0C7M6 154 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 PNMA6AP0CW24 399 aaPredicted RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 POU5F1BQ06416 359 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 MAP2K5Q13163 448 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 AMHR2Q16671 573 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 ZBTB41Q5SVQ8 909 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 PAPD7Q5XG87 772 aaKnown RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 OLFML2BQ68BL8 750 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 ZPBP2Q6X784 338 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TRAPPC11Q7Z392 1133 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TCP11Q8WWU5 503 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 ZBTB45Q96K62 511 aaPredicted RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 FZD8Q9H461 694 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 AZI2Q9H6S1 392 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 IFT122Q9HBG6 1241 aa9.67□□□□□ -0.86
TDP1-210ENST00000554976 TOPORSQ9NS56 1045 aaPredicted RBP9.67□□□□□ -0.86
TDP1-210ENST00000554976 SLU7O95391 586 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 C4BPAP04003 597 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 MARK3P27448 753 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 GCLMP48507 274 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ACVR2BQ13705 512 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ZNF484Q5JVG2 852 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ZNF569Q5MCW4 686 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 EXOC8Q8IYI6 725 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 SECISBP2LQ93073 1101 aaKnown RBP9.66□□□□□ -0.86
TDP1-210ENST00000554976 ZBTB10Q96DT7 871 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 ERO1AQ96HE7 468 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 HHIPL1Q96JK4 782 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 KREMEN1Q96MU8 473 aa9.66□□□□□ -0.86
TDP1-210ENST00000554976 POP1Q99575 1024 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms