RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 HSPA6P17066 643 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 MXI1P50539 228 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 POU5F1Q01860 360 aaKnown RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TRAF1Q13077 416 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 CYB5D1Q6P9G0 228 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PRELID2Q8N945 189 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 C1orf54Q8WWF1 131 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 GMCL1Q96IK5 515 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 NUP85Q9BW27 656 aa10.23□□□□□ -0.77
SYNE2-213ENST00000554805 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 TTC7AQ9ULT0 858 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-213ENST00000554805 PASKQ96RG2 1323 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 MYH4Q9Y623 1939 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 PODXLO00592 558 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 OPLAHO14841 1288 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 PSMD10O75832 226 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CLTAP09496 248 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 PYGMP11217 842 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 KRT5P13647 590 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 NPR1P16066 1061 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 NF2P35240 595 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 GJC1P36383 396 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 JAG1P78504 1218 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 PPP3CAQ08209 521 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ADCY2Q08462 1091 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ERMARDQ5T6L9 678 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 INTS8Q75QN2 995 aaKnown RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 C3orf20Q8ND61 904 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ACCSQ96QU6 501 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 COL5A3P25940 1745 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 IGLV3-22A0A075B6J6 115 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CCT8L1PA6NM43 557 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CYP3A4P08684 503 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 VCAM1P19320 739 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC63Q8NA47 563 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ZNF564Q8TBZ8 553 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 TBC1D31Q96DN5 1066 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ZDHHC18Q9NUE0 388 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 WRAP73Q9P2S5 460 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 ODF2LQ9ULJ1 636 aa10.22□□□□□ -0.77
SYNE2-213ENST00000554805 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
SYNE2-213ENST00000554805 TCRBV7S2A1N4TA0A589 114 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 RTN2O75298 545 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ZBTB7AO95365 584 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ECEL1O95672 775 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 DLATP10515 647 aaKnown RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 EZRP15311 586 aaKnown RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ADCY1Q08828 1119 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 KIF22Q14807 665 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 CHADLQ6NUI6 762 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 TAOK1Q7L7X3 1001 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 PODNQ7Z5L7 613 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 TBC1D1Q86TI0 1168 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 FUKQ8N0W3 1084 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 GMCL1P1Q8NEA9 526 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 TLCD1Q96CP7 247 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 GPR88Q9GZN0 384 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 GSTTP1A0A1W2PQM5 241 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 SLC16A4O15374 487 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 CLDN3O15551 220 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 COILP38432 576 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 SLMAPQ14BN4 828 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 LONRF1Q17RB8 773 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 UBAP2Q5T6F2 1119 aaKnown RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 TTC27Q6P3X3 843 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ZDHHC24Q6UX98 284 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 RNF207Q6ZRF8 634 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 CPXCR1Q8N123 301 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 SAAL1Q96ER3 474 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 SGSM3Q96HU1 749 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 POP1Q99575 1024 aaKnown RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 SCAF8Q9UPN6 1271 aaKnown RBP10.21□□□□□ -0.77
SYNE2-213ENST00000554805 FRMPD4Q14CM0 1322 aa10.21□□□□□ -0.77
SYNE2-213ENST00000554805 ECE2O60344 883 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 PEX3P56589 373 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 RWDD2BP57060 319 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 SGO2Q562F6 1265 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 CROCCP2Q86T23 111 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.78
SYNE2-213ENST00000554805 CCDC50Q8IVM0 306 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 CHURC1Q8WUH1 139 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 SEC14L1Q92503 715 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 SLC5A5Q92911 643 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 PAIP2Q9BPZ3 127 aaKnown RBP10.21□□□□□ -0.78
SYNE2-213ENST00000554805 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 TMEM206Q9H813 350 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 HOMER2Q9NSB8 354 aa10.21□□□□□ -0.78
SYNE2-213ENST00000554805 DMAC2Q9NW81 257 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms