RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FGD4Q96M96 766 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 UHRF1Q96T88 793 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 SIL1Q9H173 461 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 EPN3Q9H201 632 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 APEX2Q9UBZ4 518 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 VCANP13611 3396 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 CLTBP09497 229 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 CYBAP13498 195 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 VAV1P15498 845 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 CD247P20963 164 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ITGB8P26012 769 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 KIR2DL1P43626 348 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 KIR2DL2P43627 348 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 USP14P54578 494 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF445P59923 1031 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 FPGSQ05932 587 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 MVPQ14764 893 aaKnown RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 TCEAL1Q15170 157 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 LRRC41Q15345 812 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 SV2CQ496J9 727 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 C2orf27AQ580R0 203 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 EGFLAMQ63HQ2 1017 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ATF7IPQ6VMQ6 1270 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 LBX2Q6XYB7 198 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 NLRX1Q86UT6 975 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 C12orf42Q96LP6 360 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 NOL10Q9BSC4 688 aaKnown RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 SPATA9Q9BWV2 254 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 NSUN3Q9H649 340 aaKnown RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 GP6Q9HCN6 339 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 HOXC10Q9NYD6 342 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 FBXL21Q9UKT6 434 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ZBTB21Q9ULJ3 1066 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 YBX2Q9Y2T7 364 aaKnown RBP5.91□□□□□ -1.46
ATXN3-228ENST00000554592 PTPRCP08575 1304 aa5.91□□□□□ -1.46
ATXN3-228ENST00000554592 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 FADS2P1A8MWK0 482 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 MEIS1O00470 390 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 ENPP3O14638 875 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 NRDCO43847 1150 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 SQSTM1Q13501 440 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 RTP2Q5QGT7 225 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 PRAMEF19Q5SWL8 479 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 ANO1Q5XXA6 986 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 CCDC174Q6PII3 467 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 CRTC3Q6UUV7 619 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF662Q6ZS27 426 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 RNF180Q86T96 592 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 SPATA5Q8NB90 893 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 TMEM52Q8NDY8 209 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-228ENST00000554592 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-228ENST00000554592 TOX2Q96NM4 488 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 LGR4Q9BXB1 951 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 BTBD7Q9P203 1132 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 NRBP1Q9UHY1 535 aa5.9□□□□□ -1.46
ATXN3-228ENST00000554592 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
ATXN3-228ENST00000554592 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1B0GUL7 405 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1W2PQU0 124 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 TIMP1P01033 207 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 GH2P01242 217 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ITGAVP06756 1048 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 FAM153BP0C7A2 387 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 RARBP10826 455 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 NAT2P11245 290 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ADORA2AP29274 412 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 GALK1P51570 392 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 COG2Q14746 738 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 GORABQ5T7V8 394 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 CCDC129Q6ZRS4 1044 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ANKRD33Q7Z3H0 272 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ADAT2Q7Z6V5 191 aaKnown RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 IRF2BP1Q8IU81 584 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 KSR1Q8IVT5 923 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 ABRAQ8N0Z2 381 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-228ENST00000554592 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 SHCBP1Q8NEM2 672 aa5.89□□□□□ -1.47
ATXN3-228ENST00000554592 TGFBRAP1Q8WUH2 860 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms