RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MARCKSP29966 332 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 MCM4P33991 863 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 GRIN1Q05586 938 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 NOMO2Q5JPE7 1267 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 ATAT1Q5SQI0 421 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 KIAA1841Q6NSI8 718 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 RDM1Q8NG50 284 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 KCNG4Q8TDN1 519 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 BCL7CQ8WUZ0 217 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 IGSF21Q96ID5 467 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 NLRP4Q96MN2 994 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 INO80BQ9C086 356 aaPredicted RBP15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 NRDE2Q9H7Z3 1164 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 LIMD1Q9UGP4 676 aa15.58■□□□□ 0.08
SPTLC2-202ENST00000554365 WDR81Q562E7 1941 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 MEIS3P2A8K0S8 358 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 GALTP07902 379 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 OR52Z1P0C646 297 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 CTSAP10619 480 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 NUBP1P53384 320 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 POLGP54098 1239 aaPredicted RBP15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 GIT2Q14161 759 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 CALCRLQ16602 461 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 TMC5Q6UXY8 1006 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 CATSPER4Q7RTX7 472 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 DDX53Q86TM3 631 aaKnown RBP15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 CABP7Q86V35 215 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 ZNF410Q86VK4 478 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 KSR1Q8IVT5 923 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 TMEM105Q8N8V8 129 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 RSPH1Q8WYR4 309 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 TRAIPQ9BWF2 469 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 MFSD1Q9H3U5 465 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 LMBRD1Q9NUN5 540 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 FAM105AQ9NUU6 356 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 DNAJB4Q9UDY4 337 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 PCDHA7Q9UN72 937 aa15.57■□□□□ 0.08
SPTLC2-202ENST00000554365 IGKV6-21A0A0C4DH24 114 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 CARNS1A5YM72 827 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 LAD1O00515 517 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 GADD45BO75293 160 aaPredicted RBP15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 STBD1O95210 358 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 PRPHP41219 470 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 SLC11A1P49279 550 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 ARL6IP4Q66PJ3 421 aaKnown RBP15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 PLA2G4FQ68DD2 849 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 ZDHHC14Q8IZN3 488 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 SLC22A17Q8WUG5 538 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 SNX27Q96L92 541 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 CEP89Q96ST8 783 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 SRPRBQ9Y5M8 271 aaKnown RBP15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 IRAK3Q9Y616 596 aa15.56■□□□□ 0.08
SPTLC2-202ENST00000554365 TBX3O15119 743 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 PRPF40AO75400 957 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 MAFO75444 373 aaPredicted RBP15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 OFD1O75665 1012 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 SSBP05455 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 RAB27AP51159 221 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 B3GNT9Q6UX72 402 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 ZNF280BQ86YH2 543 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 KRI1Q8N9T8 703 aaKnown RBP15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 FEZF2Q8TBJ5 459 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 URGCPQ8TCY9 931 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 PGBD4Q96DM1 585 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 CLIC6Q96NY7 704 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 USTQ9Y2C2 406 aa15.55■□□□□ 0.08
SPTLC2-202ENST00000554365 CUTAO60888 179 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 KLRC2P26717 231 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 ME1P48163 572 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 PSMC5P62195 406 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 SPIRE1Q08AE8 756 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 PTPN14Q15678 1187 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 ASTLQ6HA08 431 aaPredicted RBP15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 ANO5Q75V66 913 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 PPFIBP1Q86W92 1011 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 FLCNQ8NFG4 579 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 ACSF2Q96CM8 615 aaPredicted RBP15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 FAM20AQ96MK3 541 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 VN1R3Q9BXE9 311 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 EMILIN2Q9BXX0 1053 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 SFXN1Q9H9B4 322 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 CYP26B1Q9NR63 512 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 VAV3Q9UKW4 847 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 PCDHB2Q9Y5E7 798 aa15.54■□□□□ 0.08
SPTLC2-202ENST00000554365 VWA3AA6NCI4 1184 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 B4GALT3O60512 393 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 ZNF623O75123 536 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 DDHD2O94830 711 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 NPEPPSP55786 919 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 NFKBIBQ15653 356 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 ADALQ6DHV7 355 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 SHC4Q6S5L8 630 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 CCDC149Q6ZUS6 474 aa15.53■□□□□ 0.08
SPTLC2-202ENST00000554365 ASCL5Q7RTU5 278 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms